RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 LRIG3Q6UXM1 1119 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 TIFABQ6ZNK6 161 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 MTERF4Q7Z6M4 381 aaKnown RBP13.17□□□□□ -0.3
CTSB-230ENST00000534149 ZNF433Q8N7K0 673 aaPredicted RBP13.17□□□□□ -0.3
CTSB-230ENST00000534149 OR52N5Q8NH56 324 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 C10orf105Q8TEF2 133 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 CDS1Q92903 461 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 PPCDCQ96CD2 204 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 RADILQ96JH8 1075 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 BTBD2Q9BX70 525 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 IQCGQ9H095 443 aaKnown RBP13.17□□□□□ -0.3
CTSB-230ENST00000534149 CHODLQ9H9P2 273 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 TNFRSF12AQ9NP84 129 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 RRAGDQ9NQL2 400 aaPredicted RBP13.17□□□□□ -0.3
CTSB-230ENST00000534149 SH3BP4Q9P0V3 963 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 ICAM5Q9UMF0 924 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 PTGDR2Q9Y5Y4 395 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 ACTL7BQ9Y614 415 aa13.17□□□□□ -0.3
CTSB-230ENST00000534149 A0A087WUV0 522 aaPredicted RBP13.16□□□□□ -0.3
CTSB-230ENST00000534149 EXOC1LA0A1B0GW35 172 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 A0A1W2PR80 420 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 CYTIPO60759 359 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 CRCPO75575 148 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 IGHV3-9P01782 118 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 GCAP28676 217 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 THBS2P35442 1172 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 FRKP42685 505 aaPredicted RBP13.16□□□□□ -0.3
CTSB-230ENST00000534149 FABP6P51161 128 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 SUMO3P55854 103 aaPredicted RBP13.16□□□□□ -0.3
CTSB-230ENST00000534149 ARL13AQ5H913 290 aaPredicted RBP13.16□□□□□ -0.3
CTSB-230ENST00000534149 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.16□□□□□ -0.3
CTSB-230ENST00000534149 P2RY8Q86VZ1 359 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 ZNF100Q8IYN0 542 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 CLHC1Q8NHS4 586 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 RFWD2Q8NHY2 731 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 GPR119Q8TDV5 335 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 ZNF75CPQ92670 426 aaPredicted RBP13.16□□□□□ -0.3
CTSB-230ENST00000534149 ZNF764Q96H86 408 aaPredicted RBP13.16□□□□□ -0.3
CTSB-230ENST00000534149 MRGPRX4Q96LA9 322 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 TSSK3Q96PN8 268 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 REEP4Q9H6H4 257 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 ANKZF1Q9H8Y5 726 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 MGAT4BQ9UQ53 548 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 CCL27Q9Y4X3 112 aa13.16□□□□□ -0.3
CTSB-230ENST00000534149 SLC35F4A4IF30 521 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 ZNF724A8MTY0 619 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 NPIPB8E9PQR5 432 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 H7C417 338 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 LY6HO94772 140 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 H6PDO95479 791 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 HSPA4LO95757 839 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 DHRS4L1P0CG22 281 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 SDC1P18827 310 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 ATP6V1C1P21283 382 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 USF1P22415 310 aaPredicted RBP13.15□□□□□ -0.3
CTSB-230ENST00000534149 PTAFRP25105 342 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 CD40P25942 277 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 LSM11P83369 360 aaKnown RBP eCLIP13.15□□□□□ -0.33e-6■□□□□ 9.5
CTSB-230ENST00000534149 CHRNEQ04844 493 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 LASP1Q14847 261 aaKnown RBP13.15□□□□□ -0.3
CTSB-230ENST00000534149 KLHL26Q53HC5 615 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 CDC73Q6P1J9 531 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 ZCCHC12Q6PEW1 402 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 SYT10Q6XYQ8 523 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 SSX8Q7RTT4 187 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 GALNT5Q7Z7M9 940 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 LCA5Q86VQ0 697 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 TMCO5AQ8N6Q1 288 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 ZNF614Q8N883 585 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 ZNF527Q8NB42 609 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 PROX1Q92786 737 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 FAM120BQ96EK7 910 aaKnown RBP13.15□□□□□ -0.3
CTSB-230ENST00000534149 OR5B2Q96R09 309 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 FMO2Q99518 471 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 GRPEL1Q9HAV7 217 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 DUSP22Q9NRW4 184 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 ACSS1Q9NUB1 689 aaPredicted RBP13.15□□□□□ -0.3
CTSB-230ENST00000534149 ZCCHC3Q9NUD5 404 aaKnown RBP13.15□□□□□ -0.3
CTSB-230ENST00000534149 KCNS2Q9ULS6 477 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 SLC25A15Q9Y619 301 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 ARFGEF3Q5TH69 2177 aa13.15□□□□□ -0.3
CTSB-230ENST00000534149 NUP214P35658 2090 aaPredicted RBP13.14□□□□□ -0.31
CTSB-230ENST00000534149 CIB4A0PJX0 185 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 H3BNH8 94 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 M0R1B8 84 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 GTPBP1O00178 669 aaKnown RBP13.14□□□□□ -0.31
CTSB-230ENST00000534149 TBX19O60806 448 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 HMGN2P05204 90 aaKnown RBP13.14□□□□□ -0.31
CTSB-230ENST00000534149 GSTA1P08263 222 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 CSF3P09919 207 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 GZMKP49863 264 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 CCR4P51679 360 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 PDE7AQ13946 482 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 QPRTQ15274 297 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 SLC25A53Q5H9E4 307 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 FAM120AOSQ5T036 256 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 CLEC6AQ6EIG7 209 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 FAM166AQ6J272 317 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 C3orf33Q6P1S2 294 aa13.14□□□□□ -0.31
CTSB-230ENST00000534149 KLHL17Q6TDP4 642 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms