RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 RPH3AQ9Y2J0 694 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 PTGDR2Q9Y5Y4 395 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 H0Y8X5 98 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 ZNF264O43296 627 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 EIF1BO60739 113 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 MT-CO3P00414 261 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 CSN2P05814 226 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 CD1CP29017 333 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 PIGFQ07326 219 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 PDZD9Q8IXQ8 264 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 ANKK1Q8NFD2 765 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 OR1J2Q8NGS2 313 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 CNIH3Q8TBE1 160 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 SLC2A12Q8TD20 617 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 BCL7BQ9BQE9 202 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 METTL8Q9H825 291 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 RIMS3Q9UJD0 308 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 SMCO3A2RU48 225 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 SMIM30A4D0T7 59 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 SOCS2O14508 198 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 HCRTR1O43613 425 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 SLC35A1P78382 337 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 ZXDAP98168 799 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 LCN8Q6JVE9 175 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 SLC25A25Q6KCM7 469 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 ZNF627Q7L945 461 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 OR4K5Q8NGD3 323 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 LKAAEAR1Q8TD35 194 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 CDS1Q92903 461 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 PLA2G2FQ9BZM2 168 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 B3GNT4Q9C0J1 378 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 ACTR6Q9GZN1 396 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 ARL6Q9H0F7 186 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 C4orf47A7E2U8 309 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 STMND1H3BQB6 276 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 PRRG2O14669 202 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 SLC43A1O75387 559 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 TOXO94900 526 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 MYF6P23409 242 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 BMXP51813 675 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 EEF1A1P68104 462 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 ARL6IP1Q15041 203 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 SCGB2B2Q4G0G5 96 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 UBE2UQ5VVX9 321 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 CNEP1R1Q8N9A8 125 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 NLGN4YQ8NFZ3 816 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 CD300LFQ8TDQ1 290 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 DOK4Q8TEW6 326 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 OR7D2Q96RA2 312 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 HSPE1-MOB4S4R3N1 261 aa10.53□□□□□ -0.72
AMBRA1-211ENST00000533727 IGHV1OR15-9A0A0B4J2B8 117 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 GABRR3A8MPY1 467 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 PSMD9O00233 223 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 PGAM2P15259 253 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 NR4A2P43354 598 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 ECH1Q13011 328 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 EXOSC7Q15024 291 aaKnown RBP10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 AGAP7PQ5VUJ5 663 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 SBSNQ6UWP8 590 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 OR8S1Q8NH09 359 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 ELP5Q8TE02 316 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 ADAMTS16Q8TE57 1224 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 SLC25A43Q8WUT9 341 aaPredicted RBP10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 RSC1A1Q92681 617 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 BORCS8Q96FH0 119 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 CCDC74BQ96LY2 380 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 PRRC1Q96M27 445 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 AGAP4Q96P64 663 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 URM1Q9BTM9 101 aaKnown RBP10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 RBM24Q9BX46 236 aaKnown RBP10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 TMEM121BQ9BXQ6 578 aaPredicted RBP10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 ABCG5Q9H222 651 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 INIPQ9NRY2 104 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 SNX11Q9Y5W9 270 aa10.52□□□□□ -0.72
AMBRA1-211ENST00000533727 ZNF891A8MT65 544 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 FZD6O60353 706 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 CEACAM5P06731 702 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 OPRL1P41146 370 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 SNRPD2P62316 118 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 SELENOWP63302 87 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 ATXN7L3Q14CW9 347 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 LINC00696Q6ZRV3 163 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 COMMD7Q86VX2 200 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 CIDECQ96AQ7 238 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 S100A16Q96FQ6 103 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 THOC3Q96J01 351 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 HCAR1Q9BXC0 346 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 VN1R3Q9BXE9 311 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 CLMPQ9H6B4 373 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 ERVK13-1Q9NX77 482 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 MAGED1Q9Y5V3 778 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 F5H0A9 414 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 HSPA12AO43301 675 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 MRPL33O75394 65 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 ITGB2P05107 769 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 IGFBP6P24592 240 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 EPHA8P29322 1005 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 POLR2HP52434 150 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 TFF2Q03403 129 aa10.52□□□□□ -0.73
AMBRA1-211ENST00000533727 SLC3A1Q07837 685 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms