RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 SBK3P0C264 359 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 ERP29P30040 261 aaKnown RBP16.4■□□□□ 0.22
PHRF1-205ENST00000533464 RAB38P57729 211 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 MRPL49Q13405 166 aaKnown RBP16.4■□□□□ 0.22
PHRF1-205ENST00000533464 LYSMD4Q5XG99 296 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 TMPPEQ6ZT21 453 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 ADIPOR2Q86V24 386 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 C19orf47Q8N9M1 422 aaKnown RBP16.4■□□□□ 0.22
PHRF1-205ENST00000533464 COQ8AQ8NI60 647 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 BORCS8Q96FH0 119 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 NIPSNAP1Q9BPW8 284 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 ARL6Q9H0F7 186 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 PSORS1C1Q9UIG5 152 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 TNFSF8P32971 234 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 PRSS3P35030 304 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 BCL6P41182 706 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 GPR19Q15760 415 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 ZNF322Q6U7Q0 402 aaPredicted RBP16.4■□□□□ 0.22
PHRF1-205ENST00000533464 B3GLCTQ6Y288 498 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 OLIG3Q7RTU3 272 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 ZNF595Q8IYB9 648 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 OR51Q1Q8NH59 317 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 SACM1LQ9NTJ5 587 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 RLIMQ9NVW2 624 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 RABL2AQ9UBK7 228 aaPredicted RBP16.4■□□□□ 0.22
PHRF1-205ENST00000533464 RABL2BQ9UNT1 228 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 BRINP1O60477 761 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 ITGB8P26012 769 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 ZNF417Q8TAU3 575 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 TMEM38AQ9H6F2 299 aa16.4■□□□□ 0.22
PHRF1-205ENST00000533464 A6NIZ1 184 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 VSTM5A8MXK1 200 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 SNAPC5O75971 98 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 CAPZA1P52907 286 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 CTBP2P56545 445 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 RAP1BP61224 184 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 RAP1AP62834 184 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 EFR3AQ14156 821 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 AWAT2Q6E213 333 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 TBX21Q9UL17 535 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 RASD1Q9Y272 281 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 SLC16A7O60669 478 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 OPN1LWP04000 364 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 PBX2P40425 430 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 CSNK1EP49674 416 aaKnown RBP16.39■□□□□ 0.21
PHRF1-205ENST00000533464 SRYQ05066 204 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 GAB1Q13480 694 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 SQSTM1Q13501 440 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 SERPINA12Q8IW75 414 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 OR13F1Q8NGS4 319 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 FGF22Q9HCT0 170 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 OBP2AQ9NY56 170 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 SLC16A6O15403 523 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 PTHP01270 115 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 TMEM240Q5SV17 173 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 ATAD3CQ5T2N8 411 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 PARM1Q6UWI2 310 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 C1QTNF3Q9BXJ4 246 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 ZDHHC5Q9C0B5 715 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 MLXQ9UH92 298 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 DOCK2Q92608 1830 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 ARHGAP33O14559 1287 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 AQP9O43315 295 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 CTHP32929 405 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 DAP3P51398 398 aaKnown RBP16.39■□□□□ 0.21
PHRF1-205ENST00000533464 RELAQ04206 551 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 ILKQ13418 452 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 SLC48A1Q6P1K1 146 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 SSX6Q7RTT6 188 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 ENTHD1Q8IYW4 607 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 BEST3Q8N1M1 668 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 OR6T1Q8NGN1 323 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 RHOXF1Q8NHV9 184 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 FAM71F1Q96KD3 344 aaPredicted RBP16.39■□□□□ 0.21
PHRF1-205ENST00000533464 TAS2R16Q9NYV7 291 aa16.39■□□□□ 0.21
PHRF1-205ENST00000533464 PTRH2Q9Y3E5 179 aaKnown RBP16.39■□□□□ 0.21
PHRF1-205ENST00000533464 N4BP2Q86UW6 1770 aaPredicted RBP16.39■□□□□ 0.21
PHRF1-205ENST00000533464 ARAP2Q8WZ64 1704 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 ZNF850A8MQ14 1090 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 NOTOA8MTQ0 251 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 PLEKHN1Q494U1 663 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-205ENST00000533464 FAM205BPQ63HN1 556 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 HAVCR2Q8TDQ0 301 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 PDXPQ96GD0 296 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 CD93Q9NPY3 652 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 F13BP05160 661 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 TMEM225BP0DP42 221 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 FAM76BQ5HYJ3 339 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 CCSAPQ6IQ19 270 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-205ENST00000533464 ZNF704Q6ZNC4 412 aaPredicted RBP16.38■□□□□ 0.21
PHRF1-205ENST00000533464 A4GALTQ9NPC4 353 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 OR2S2Q9NQN1 319 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 SULT2B1O00204 365 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 HPGDSO60760 199 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 CXCL10P02778 98 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 SLC2A5P22732 501 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 GNRHRP30968 328 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 ZP2Q05996 745 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 PCGF3Q3KNV8 242 aa16.38■□□□□ 0.21
PHRF1-205ENST00000533464 CCDC58Q4VC31 144 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms