RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 GUSBP08236 651 aa15.44■□□□□ 0.06
PHRF1-204ENST00000532550 PABPC4LP0CB38 370 aaKnown RBP15.44■□□□□ 0.06
PHRF1-204ENST00000532550 POU2F1P14859 743 aa15.44■□□□□ 0.06
PHRF1-204ENST00000532550 PRKCAP17252 672 aa15.44■□□□□ 0.06
PHRF1-204ENST00000532550 ANXA11P50995 505 aaKnown RBP15.44■□□□□ 0.06
PHRF1-204ENST00000532550 HPCAP84074 193 aa15.44■□□□□ 0.06
PHRF1-204ENST00000532550 TMEM176BQ3YBM2 270 aaPredicted RBP15.44■□□□□ 0.06
PHRF1-204ENST00000532550 GPAT3Q53EU6 434 aa15.44■□□□□ 0.06
PHRF1-204ENST00000532550 OLIG3Q7RTU3 272 aa15.44■□□□□ 0.06
PHRF1-204ENST00000532550 RNF130Q86XS8 419 aa15.44■□□□□ 0.06
PHRF1-204ENST00000532550 ATP6V1C2Q8NEY4 427 aa15.44■□□□□ 0.06
PHRF1-204ENST00000532550 OIT3Q8WWZ8 545 aa15.44■□□□□ 0.06
PHRF1-204ENST00000532550 ARSGQ96EG1 525 aa15.44■□□□□ 0.06
PHRF1-204ENST00000532550 MAELQ96JY0 434 aaKnown RBP15.44■□□□□ 0.06
PHRF1-204ENST00000532550 THUMPD3Q9BV44 507 aaKnown RBP15.44■□□□□ 0.06
PHRF1-204ENST00000532550 KCNE5Q9UJ90 142 aa15.44■□□□□ 0.06
PHRF1-204ENST00000532550 CLEC4AQ9UMR7 237 aa15.44■□□□□ 0.06
PHRF1-204ENST00000532550 F8P00451 2351 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 TEP1Q99973 2627 aaKnown RBP15.43■□□□□ 0.06
PHRF1-204ENST00000532550 UBDO15205 165 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 GSNP06396 782 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 ART1P52961 327 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 IST1P53990 364 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 QPRTQ15274 297 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 GUSBP1Q15486 140 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 TESK1Q15569 626 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 GSTA3Q16772 222 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 PDCD4Q53EL6 469 aaKnown RBP15.43■□□□□ 0.06
PHRF1-204ENST00000532550 AP1ARQ63HQ0 302 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 TYW3Q6IPR3 259 aaKnown RBP15.43■□□□□ 0.06
PHRF1-204ENST00000532550 ZNF619Q8N2I2 560 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 OR6K3Q8NGY3 331 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 ROBO4Q8WZ75 1007 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 NINJ1Q92982 152 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 CPNE4Q96A23 557 aaPredicted RBP15.43■□□□□ 0.06
PHRF1-204ENST00000532550 INPP5KQ9BT40 448 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 SAP130Q9H0E3 1048 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 LIME1Q9H400 295 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 PLSCR4Q9NRQ2 329 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 LIPT1Q9Y234 373 aa15.43■□□□□ 0.06
PHRF1-204ENST00000532550 C16orf97H3BN30 126 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 HMGN4O00479 90 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 RFXANKO14593 260 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 DIAPH2O60879 1101 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 SS18L1O75177 396 aaPredicted RBP15.42■□□□□ 0.06
PHRF1-204ENST00000532550 UBTFL6P0CB48 400 aaPredicted RBP15.42■□□□□ 0.06
PHRF1-204ENST00000532550 PGCP20142 388 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 DNASE1P24855 282 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 SHC1P29353 583 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 TXNL4AP83876 142 aaKnown RBP15.42■□□□□ 0.06
PHRF1-204ENST00000532550 SKP2Q13309 424 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 MAPK14Q16539 360 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 TIGD2Q4W5G0 525 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 SLC25A53Q5H9E4 307 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 TMEM234Q8WY98 164 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 MARK4Q96L34 752 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 ATP6V1G3Q96LB4 118 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 WFIKKN1Q96NZ8 548 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 FANCFQ9NPI8 374 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 SERINC1Q9NRX5 453 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.42■□□□□ 0.06
PHRF1-204ENST00000532550 ZNF226Q9NYT6 803 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 ZIM2Q9NZV7 527 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 ST6GALNAC2Q9UJ37 374 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 SLC35A3Q9Y2D2 325 aa15.42■□□□□ 0.06
PHRF1-204ENST00000532550 CENPVL1A0A0U1RR11 272 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 KIAA0513O60268 411 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 H6PDO95479 791 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 ANP32DO95626 131 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 NTN1O95631 604 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 KRT75O95678 551 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 CD1EP15812 388 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 SLC7A1P30825 629 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 UGT2B10P36537 528 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 CDKN2CP42773 168 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 CHRNEQ04844 493 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 SELENBP1Q13228 472 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 EXOC3L2Q2M3D2 409 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 SPNS3Q6ZMD2 512 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 FRRS1Q6ZNA5 592 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 STK32CQ86UX6 486 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 GOLGA6L1Q8N7Z2 621 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 LRRC8CQ8TDW0 803 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 ZFP90Q8TF47 636 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 ST8SIA1Q92185 356 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 ZG16BQ96DA0 208 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 TRNT1Q96Q11 434 aaKnown RBP15.41■□□□□ 0.06
PHRF1-204ENST00000532550 OR52B2Q96RD2 323 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 MED18Q9BUE0 208 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 KLHL4Q9C0H6 718 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 RMND5AQ9H871 391 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 CCM2LQ9NUG4 571 aaPredicted RBP15.41■□□□□ 0.06
PHRF1-204ENST00000532550 KLHL28Q9NXS3 571 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 TESMINQ9Y4I5 508 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 USH1CQ9Y6N9 552 aa15.41■□□□□ 0.06
PHRF1-204ENST00000532550 AKAP9Q99996 3911 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 PRAMEF27A3QJZ7 478 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 ETV2O00321 342 aaPredicted RBP15.4■□□□□ 0.06
PHRF1-204ENST00000532550 DNAJA2O60884 412 aa15.4■□□□□ 0.06
PHRF1-204ENST00000532550 PRKD3O94806 890 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms