RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 G3V2L1 256 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 TLX2O43763 284 aaPredicted RBP15.39■□□□□ 0.05
PKP3-208ENST00000531857 EFNA2O43921 213 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 NGFRP08138 427 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 ACP2P11117 423 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 PRPS2P11908 318 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 SFTPDP35247 375 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 PRKAG1P54619 331 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 CARD18P57730 90 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 ZNF239Q16600 458 aaKnown RBP15.39■□□□□ 0.05
PKP3-208ENST00000531857 IMPG1Q17R60 797 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 ZNF672Q499Z4 452 aaPredicted RBP15.39■□□□□ 0.05
PKP3-208ENST00000531857 GTF2IRD2BQ6EKJ0 949 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 NOXRED1Q6NXP6 359 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 GTF2IRD2Q86UP8 949 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 C10orf107Q8IVU9 208 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 TUSC5Q8IXB3 177 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 FITM2Q8N6M3 262 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 FAM110BQ8TC76 370 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 ACTRT2Q8TDY3 377 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 CIDECQ96AQ7 238 aaPredicted RBP15.39■□□□□ 0.05
PKP3-208ENST00000531857 ZBED6CLQ96FA7 236 aaPredicted RBP15.39■□□□□ 0.05
PKP3-208ENST00000531857 KLHL15Q96M94 604 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 RAB3IPQ96QF0 476 aaPredicted RBP15.39■□□□□ 0.05
PKP3-208ENST00000531857 SRXN1Q9BYN0 137 aa15.39■□□□□ 0.05
PKP3-208ENST00000531857 ESRP2Q9H6T0 727 aaKnown RBP15.39■□□□□ 0.05
PKP3-208ENST00000531857 EML4Q9HC35 981 aaKnown RBP15.39■□□□□ 0.05
PKP3-208ENST00000531857 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 A0A0G2JND7 137 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 GOLGA8QA0A0J9YX86 632 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 A0A1W2PP18 115 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 GOLGA8OA6NCC3 632 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 DPRXA6NFQ7 191 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 GOLGA8NF8WBI6 632 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 KCNK2O95069 426 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 ADAP00813 363 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 CD8AP01732 235 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 IFI6P09912 130 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 LINGO3P0C6S8 592 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 ME2P23368 584 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 IL32P24001 234 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 ADH6P28332 368 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 PRIM2P49643 509 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 MNAT1P51948 309 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 BSPH1Q075Z2 132 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 CD226Q15762 336 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 TMEM201Q5SNT2 666 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 PDSS1Q5T2R2 415 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 IKBIPQ70UQ0 350 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 TRIM46Q7Z4K8 759 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 CCNYL1Q8N7R7 359 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 SLC16A11Q8NCK7 471 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 HSD17B8Q92506 261 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 GIMAP5Q96F15 307 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 OTUB1Q96FW1 271 aaPredicted RBP15.38■□□□□ 0.05
PKP3-208ENST00000531857 MECRQ9BV79 373 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 TMEM120AQ9BXJ8 343 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 C12orf65Q9H3J6 166 aaKnown RBP15.38■□□□□ 0.05
PKP3-208ENST00000531857 TNFRSF12AQ9NP84 129 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 KLHL13Q9P2N7 655 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 WBP11Q9Y2W2 641 aaKnown RBP15.38■□□□□ 0.05
PKP3-208ENST00000531857 RAP2CQ9Y3L5 183 aa15.38■□□□□ 0.05
PKP3-208ENST00000531857 GPRIN2O60269 458 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 RAMP1O60894 148 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 UBOX5O94941 541 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 HSPA4LO95757 839 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 IFNA2P01563 188 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 GPC1P35052 558 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 FOXF1Q12946 379 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 DUSP5Q16690 384 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 VPS26BQ4G0F5 336 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 ZNF385BQ569K4 471 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 CCNJQ5T5M9 372 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 DNAJC14Q6Y2X3 702 aaPredicted RBP15.37■□□□□ 0.05
PKP3-208ENST00000531857 CDRT4Q8N9R6 151 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 NUP43Q8NFH3 380 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 B4GALNT2Q8NHY0 566 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 C16orf58Q96GQ5 468 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 TRAF4Q9BUZ4 470 aaPredicted RBP15.37■□□□□ 0.05
PKP3-208ENST00000531857 TRIM2Q9C040 744 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 NGBQ9NPG2 151 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 CCL27Q9Y4X3 112 aa15.37■□□□□ 0.05
PKP3-208ENST00000531857 NUP214P35658 2090 aaPredicted RBP15.36■□□□□ 0.05
PKP3-208ENST00000531857 ZNF814B7Z6K7 855 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 PDPK1O15530 556 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 OIP5O43482 229 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 PABPC4LP0CB38 370 aaKnown RBP15.36■□□□□ 0.05
PKP3-208ENST00000531857 PTNP21246 168 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 RNF144AP50876 292 aaPredicted RBP15.36■□□□□ 0.05
PKP3-208ENST00000531857 MANFP55145 182 aaKnown RBP15.36■□□□□ 0.05
PKP3-208ENST00000531857 IRX1P78414 480 aaPredicted RBP15.36■□□□□ 0.05
PKP3-208ENST00000531857 KIAA0040Q15053 153 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 RNPS1Q15287 305 aaKnown RBP15.36■□□□□ 0.05
PKP3-208ENST00000531857 CFAP157Q5JU67 520 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 SZRD1Q7Z422 152 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 CEP70Q8NHQ1 597 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 TMEM158Q8WZ71 300 aa15.36■□□□□ 0.05
PKP3-208ENST00000531857 KISS1RQ969F8 398 aaPredicted RBP15.36■□□□□ 0.05
PKP3-208ENST00000531857 REXO5Q96IC2 774 aaKnown RBP15.36■□□□□ 0.05
PKP3-208ENST00000531857 LRTM1Q9HBL6 345 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms