RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ATCAYQ86WG3 371 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 FAM71CQ8NEG0 241 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 SLC2A12Q8TD20 617 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 ZNF721Q8TF20 911 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 HSPBAP1Q96EW2 488 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 SLC7A5P2Q9GIP4 190 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 SLIRPQ9GZT3 109 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 C12orf10Q9HB07 376 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 DHCR7Q9UBM7 475 aaKnown RBP13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 COPS7AQ9UBW8 275 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 CACNA1EQ15878 2313 aa13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 COL5A1P20908 1838 aaPredicted RBP13.6□□□□□ -0.23
ECHDC1-220ENST00000528402 A0A087WUJ7 227 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 C2orf92A0A1B0GVN3 265 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 A8MU76 341 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 HYAL3O43820 417 aaPredicted RBP13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 DDAH2O95865 285 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 NGFRP08138 427 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 CPEP16870 476 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 HK1P19367 917 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 SLC6A8P48029 635 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 ACSM1Q08AH1 577 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 SIGLEC14Q08ET2 396 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 NSDHLQ15738 373 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 PLK5Q496M5 336 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 WBP2NLQ6ICG8 309 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 CXXC5Q7LFL8 322 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 ARHGAP22Q7Z5H3 698 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 OAFQ86UD1 273 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 ZSCAN1Q8NBB4 408 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 OR4C3Q8NH37 302 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 PFN4Q8NHR9 129 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 MCFD2Q8NI22 146 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 RPL3LQ92901 407 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 ADIPOR1Q96A54 375 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 ZC3H10Q96K80 434 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 OR8D2Q9GZM6 311 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 NXF2Q9GZY0 626 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 CMC2Q9NRP2 79 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 INPP5EQ9NRR6 644 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 NDUFB11Q9NX14 153 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 MUTYHQ9UIF7 546 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 STUB1Q9UNE7 303 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 SSR3Q9UNL2 185 aa13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 ARID1BQ8NFD5 2236 aaPredicted RBP13.59□□□□□ -0.23
ECHDC1-220ENST00000528402 SPTBN5Q9NRC6 3674 aaKnown RBP13.58□□□□□ -0.23
ECHDC1-220ENST00000528402 SZT2Q5T011 3432 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 IGLV3-12A0A075B6K2 115 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 A0A1W2PQD3 144 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 ONECUT2O95948 504 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 IFNGP01579 166 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 CYC1P08574 325 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 ZGLP1P0C6A0 271 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 PAICSP22234 425 aaKnown RBP13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 DUSP3P51452 185 aaPredicted RBP13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 FOXK2Q01167 660 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 TPBGQ13641 420 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 HLA-BQ31612 363 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 ANKDD1AQ495B1 522 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 FNDC7Q5VTL7 733 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 TSSK4Q6SA08 328 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 HSDL2Q6YN16 418 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 MEPCEQ7L2J0 689 aaKnown RBP13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 SLC29A4Q7RTT9 530 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 BCDIN3DQ7Z5W3 292 aaKnown RBP13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 LAPTM4BQ86VI4 370 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 MEX3DQ86XN8 651 aaKnown RBP13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 SLC15A4Q8N697 577 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 OR1N1Q8NGS0 311 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 OR52N1Q8NH53 320 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 GRHL3Q8TE85 626 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 SGTBQ96EQ0 304 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 COQ7Q99807 217 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 NUDT22Q9BRQ3 303 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 CHCHD6Q9BRQ6 235 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 IFT27Q9BW83 186 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 LAT2Q9GZY6 243 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 OR51E2Q9H255 320 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 ATP13A2Q9NQ11 1180 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 AKIP1Q9NQ31 210 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 MEPEQ9NQ76 525 aaPredicted RBP13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 C20orf141Q9NUB4 165 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 TAS2R16Q9NYV7 291 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 CLEC2DQ9UHP7 191 aa13.58□□□□□ -0.24
ECHDC1-220ENST00000528402 LOC100506127A0A0U1RQW1 187 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 OR2W5A6NFC9 320 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 METTL15A6NJ78 407 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 SLC22A31A6NKX4 558 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 RIIAD1A6NNX1 92 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 PRR23D1E9PI22 279 aaPredicted RBP13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 GTPBP1O00178 669 aaKnown RBP13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 TAF4O00268 1085 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 ZNF264O43296 627 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 IDH3BO43837 385 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 FOXD2O60548 495 aaPredicted RBP13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 EIF4E2O60573 245 aaKnown RBP13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 UTS2O95399 124 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 IGHA1P01876 353 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 ADRA2AP08913 450 aa13.57□□□□□ -0.24
ECHDC1-220ENST00000528402 TSPAN19P0C672 248 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms