RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 INPP5JQ15735 1006 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TBCEQ15813 527 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 NDUFAF6Q330K2 333 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 GLYR1Q49A26 553 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 CBWD6Q4V339 395 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 COQ5Q5HYK3 327 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 PYY3Q5JQD4 70 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 EOGTQ5NDL2 527 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 RNF219Q5W0B1 726 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 ZDHHC20Q5W0Z9 365 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SAXO2Q658L1 398 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 GLYATQ6IB77 296 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SULT6B1Q6IMI4 303 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 LCN8Q6JVE9 175 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TAPT1Q6NXT6 567 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 KLHL17Q6TDP4 642 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 IL27RAQ6UWB1 636 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 FAM198BQ6UWH4 519 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 LRRN1Q6UXK5 716 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 WASH2PQ6VEQ5 465 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 GDPD4Q6W3E5 623 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 CYHR1Q6ZMK1 362 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TMPRSS11AQ6ZMR5 421 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 QSOX2Q6ZRP7 698 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TIPARPQ7Z3E1 657 aaKnown RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 MAVSQ7Z434 540 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TAF8Q7Z7C8 310 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 MYPOPQ86VE0 399 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 THOC6Q86W42 341 aaKnown RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 ZC3H3Q8IXZ2 948 aaKnown RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 FBXO36Q8NEA4 188 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 CCDC54Q8NEL0 328 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 OR11H4Q8NGC9 324 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 OR2T11Q8NH01 316 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 OLIG1Q8TAK6 271 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 C9orf43Q8TAL5 461 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC35F5Q8WV83 523 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 LCN9Q8WX39 176 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 LPAR1Q92633 364 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 UCN3Q969E3 161 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 NT5C3BQ969T7 300 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC35C1Q96A29 364 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 RCN3Q96D15 328 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 ORAI1Q96D31 301 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 MALSU1Q96EH3 234 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 PHF21BQ96EK2 531 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 KAZALD1Q96I82 304 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF354BQ96LW1 612 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 MBOAT7Q96N66 472 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SIGLEC11Q96RL6 698 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 GAL3ST4Q96RP7 486 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 ACOX2Q99424 681 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SEPT5Q99719 369 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SMOQ99835 787 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 PRRT1Q99946 306 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SYT11Q9BT88 431 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 HTATIP2Q9BUP3 242 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 APOL6Q9BWW8 343 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 C1QTNF6Q9BXI9 259 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 ITPAQ9BY32 194 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 THAP2Q9H0W7 228 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 MED28Q9H204 178 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC25A32Q9H2D1 315 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 BOLA2Q9H3K6 86 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TASP1Q9H6P5 420 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 ACP6Q9NPH0 428 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 LHX9Q9NQ69 397 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 XPNPEP3Q9NQH7 507 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TREX1Q9NSU2 369 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 NLE1Q9NVX2 485 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 KLHL28Q9NXS3 571 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SCN3BQ9NY72 215 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 RBAKQ9NYW8 714 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 CALML5Q9NZT1 146 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 STOX2Q9P2F5 926 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 TRPC4Q9UBN4 977 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 MARCOQ9UEW3 520 aaPredicted RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 ADAM28Q9UKQ2 775 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 PIN4Q9Y237 131 aaKnown RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 CARHSP1Q9Y2V2 147 aaKnown RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 FBXO7Q9Y3I1 522 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 CLDN16Q9Y5I7 305 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 NPTNQ9Y639 398 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 V9GYH0 126 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 BCORQ6W2J9 1755 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 RBBP6Q7Z6E9 1792 aaKnown RBP3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 NOTCH4Q99466 2003 aa3.43□□□□□ -1.86
CLNS1A-209ENST00000527299 SPATA31D1Q6ZQQ2 1576 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 TIAM2Q8IVF5 1701 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ZFC3H1O60293 1989 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ANKRD31Q8N7Z5 1873 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 MEIKINA0A087WXM9 373 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 A0A0J9YYE9 177 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 TMEM72A0PK05 275 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 COLCA2A8K830 154 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 A8MWP6 167 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 DISC1C4P0D8 188 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 INMT-MINDY4F8WBC2 141 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SMIM22K7EJ46 135 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 M0R143 59 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms