RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 OR51V1Q9H2C8 321 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 ZNF275Q9NSD4 429 aaPredicted RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 A4GNTQ9UNA3 340 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 PLEKHA6Q9Y2H5 1048 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 TMEM218A2RU14 115 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 OR2M5A3KFT3 312 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 LRIT2A6NDA9 550 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 CPSF4LA6NMK7 179 aaKnown RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 OR2AT4A6NND4 320 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 ZNF705EA8MWA4 302 aaPredicted RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 GABARAPH6UMI1 98 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 SCAMP1O15126 338 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 SMAD9O15198 467 aaKnown RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 GSTZ1O43708 216 aaPredicted RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 MTX2O75431 263 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 KLHL18O94889 574 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 OR2A4O95047 310 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 FARS2O95363 451 aaKnown RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 RB1P06400 928 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 MPC1LP0DKB6 136 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 ALPPL2P10696 532 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 PTNP21246 168 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 CSF2RBP32927 897 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 AP1S1P61966 158 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 MAT1AQ00266 395 aaKnown RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 RING1Q06587 406 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 TSPAN31Q12999 210 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 PEA15Q15121 130 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 PGGHGQ32M88 737 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 LRRC37A5PQ49AS3 106 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 DUSP28Q4G0W2 176 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 UBE2NLQ5JXB2 153 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 ZNF425Q6IV72 752 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 UQCC3Q6UW78 93 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 RBMS3Q6XE24 437 aaKnown RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 MAMSTRQ6ZN01 415 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 TPGS1Q6ZTW0 290 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 C6orf120Q7Z4R8 191 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 TMEM151BQ8IW70 566 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 WDSUB1Q8N9V3 476 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 ZNF485Q8NCK3 441 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 DNAAF1Q8NEP3 725 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 OR2T33Q8NG76 320 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 OR52L1Q8NGH7 329 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 OR6T1Q8NGN1 323 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 THEM6Q8WUY1 208 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 EXOSC8Q96B26 276 aaKnown RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 TMEM159Q96B96 161 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 MRPL48Q96GC5 212 aaKnown RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 OR2A7Q96R45 310 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 PINK1Q9BXM7 581 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 TTTY10Q9BZA0 68 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 SLC6A16Q9GZN6 736 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 OR51M1Q9H341 326 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 KCNK12Q9HB15 430 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 A4GALTQ9NPC4 353 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 RASL12Q9NYN1 266 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 KLK11Q9UBX7 282 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 ZNF629Q9UEG4 869 aaPredicted RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 PCDHB10Q9UN67 800 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 SLC22A7Q9Y694 548 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 SIRT4Q9Y6E7 314 aaPredicted RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 LAMA3Q16787 3333 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 MYO16Q9Y6X6 1858 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 A0A087WUU8 490 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 A0A0D9SG52 128 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 C17orf102A2RUQ5 167 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 TRAPPC13A5PLN9 417 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 E9PI62 339 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 F5H0A9 414 aaPredicted RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 C3orf80F5H4A9 247 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 GAPDHSO14556 408 aaPredicted RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 SLC16A5O15375 505 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 ZNF821O75541 412 aaPredicted RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 SLC2A10O95528 541 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 IGHA1P01876 353 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 IL5P05113 134 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 PTAFRP25105 342 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 MAPK3P27361 379 aaPredicted RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 GPR143P51810 404 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 PNLIPRP1P54315 467 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 PSMD4P55036 377 aaKnown RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 E2F1Q01094 437 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 DEFA6Q01524 100 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 TRAM2Q15035 370 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 SYPL1Q16563 259 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 TMEM255AQ5JRV8 349 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 SLC6A19Q695T7 634 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 LIN54Q6MZP7 749 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 HTR3DQ70Z44 454 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 CMTM4Q8IZR5 234 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 BEST3Q8N1M1 668 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 TBC1D19Q8N5T2 526 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 TMEM99Q8N816 258 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 FAM98AQ8NCA5 519 aaKnown RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 OR2AK2Q8NG84 335 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 OR13C5Q8NGS8 318 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 RXFP4Q8TDU9 374 aa4.39□□□□□ -1.71
HIPK3-204ENST00000525975 SETD7Q8WTS6 366 aaKnown RBP4.39□□□□□ -1.71
HIPK3-204ENST00000525975 NR4A3Q92570 626 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms