RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 POLE3Q9NRF9 147 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 MED17Q9NVC6 651 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 CNIH4Q9P003 139 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 ABI3Q9P2A4 366 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 SPRR3Q9UBC9 169 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 SUCOQ9UBS9 1254 aaKnown RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 SLC7A8Q9UHI5 535 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 NPIPA1Q9UND3 350 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 ANGPT4Q9Y264 503 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 VDAC3Q9Y277 283 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 RPH3AQ9Y2J0 694 aaPredicted RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 C15orf41Q9Y2V0 281 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 KLF13Q9Y2Y9 288 aaPredicted RBP5.88□□□□□ -1.47
CD44-214ENST00000525211 SLC6A5Q9Y345 797 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 PCDHGB7Q9Y5F8 929 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 SVILO95425 2214 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 KALRNO60229 2985 aa5.88□□□□□ -1.47
CD44-214ENST00000525211 KIAA1549Q9HCM3 1950 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 NBASA2RRP1 2371 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 ASH1LQ9NR48 2969 aaKnown RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 RELNP78509 3460 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 ERICH4A6NGS2 130 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 CYSRT1A8MQ03 144 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 C5orf58C9J3I9 102 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 GTPBP1O00178 669 aaKnown RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 EBAG9O00559 213 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 SCDO00767 359 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 TP53I11O14683 189 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 FFAR1O14842 300 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 DNAJC8O75937 253 aaPredicted RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 PRKD3O94806 890 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 DIRAS1O95057 198 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 RASAL1O95294 804 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 LGI1O95970 557 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 AGR2O95994 175 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 CSTAP01040 98 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 SEMG1P04279 462 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 DBIP07108 87 aaKnown RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 FESP07332 822 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 LINGO3P0C6S8 592 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 UBL4AP11441 157 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 IL7RP16871 459 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 PSMA4P25789 261 aaKnown RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 LCN1P31025 176 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 ADH7P40394 386 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 TMED10P49755 219 aaKnown RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 PLGLB1Q02325 96 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 KLRB1Q12918 225 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 EPS8Q12929 822 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 FOXF1Q12946 379 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 BNIP2Q12982 314 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 CCNIQ14094 377 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 VEZF1Q14119 521 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 IGFBP7Q16270 282 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 ZSCAN26Q16670 478 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 HYAL4Q2M3T9 481 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 TMEM44Q2T9K0 475 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 PLPPR5Q32ZL2 321 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 PRAMEF8Q5VWM4 474 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 C1QL3Q5VWW1 255 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 PRAMEF7Q5VXH5 474 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 RPUSD3Q6P087 351 aaKnown RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 CCDC121Q6ZUS5 278 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 CBLL1Q75N03 491 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 CARM1Q86X55 608 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 MEX3DQ86XN8 651 aaKnown RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 ARMC8Q8IUR7 673 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 P3H2Q8IVL5 708 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 PEX5LQ8IYB4 626 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 TEX19Q8NA77 164 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 OR1J4Q8NGS1 313 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 B4GALNT2Q8NHY0 566 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 PHF10Q8WUB8 498 aaKnown RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 NANOS1Q8WY41 292 aaKnown RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 C1GALT1C1Q96EU7 318 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 WBP1Q96G27 269 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 TPD52L3Q96J77 140 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 C7orf34Q96L11 122 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 ZNF597Q96LX8 424 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 BARD1Q99728 777 aaKnown RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 SH3GL1Q99961 368 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 AMBRA1Q9C0C7 1298 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 LAT2Q9GZY6 243 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 ZDHHC11Q9H8X9 412 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 DCAF13Q9NV06 445 aaKnown RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 VNN3Q9NY84 501 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 PPP4R1LQ9P1A2 415 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 PRPF19Q9UMS4 504 aaKnown RBP5.87□□□□□ -1.47
CD44-214ENST00000525211 ABCG2Q9UNQ0 655 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 CORO2BQ9UQ03 480 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 POMPQ9Y244 141 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 PCDHGB6Q9Y5F9 930 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 PCDHGB3Q9Y5G1 929 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 DNAJC13O75165 2243 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 CFAP46Q8IYW2 2715 aa5.87□□□□□ -1.47
CD44-214ENST00000525211 ZC3H12DA2A288 527 aaKnown RBP5.86□□□□□ -1.47
CD44-214ENST00000525211 OR2M5A3KFT3 312 aa5.86□□□□□ -1.47
CD44-214ENST00000525211 ANKUB1A6NFN9 424 aa5.86□□□□□ -1.47
CD44-214ENST00000525211 GSTA4O15217 222 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms