RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 KHKP50053 298 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 CBFBQ13951 182 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 ZNF141Q15928 474 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 SAXO2Q658L1 398 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 HEPHL1Q6MZM0 1159 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 OR6K3Q8NGY3 331 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 RAB3IL1Q8TBN0 382 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 ROBO4Q8WZ75 1007 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 NEURL3Q96EH8 262 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 MRGPRX4Q96LA9 322 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 CCDC115Q96NT0 180 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 OR52E6Q96RD3 313 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 PANX1Q96RD7 426 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 THUMPD3Q9BV44 507 aaKnown RBP16.61■□□□□ 0.25
CAPN1-203ENST00000525013 KLHL4Q9C0H6 718 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 ZNF350Q9GZX5 532 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 ZNF226Q9NYT6 803 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 KCNE5Q9UJ90 142 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 WDR45Q9Y484 360 aa16.61■□□□□ 0.25
CAPN1-203ENST00000525013 PRR14LQ5THK1 2151 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 CENPVL1A0A0U1RR11 272 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 CCDC154A6NI56 674 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 UGT2B17O75795 530 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 CSTAP01040 98 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 PABPC4LP0CB38 370 aaKnown RBP16.6■□□□□ 0.25
CAPN1-203ENST00000525013 UBTFL6P0CB48 400 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-203ENST00000525013 PCYT1AP49585 367 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 QPRTQ15274 297 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 GPAT3Q53EU6 434 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 GTF2IRD2BQ6EKJ0 949 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 PAMR1Q6UXH9 720 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 EIF3MQ7L2H7 374 aaKnown RBP16.6■□□□□ 0.25
CAPN1-203ENST00000525013 ZNF550Q7Z398 422 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 GTF2IRD2Q86UP8 949 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 TRIML2Q8N7C3 387 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 ROPN1LQ96C74 230 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 ARSGQ96EG1 525 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 ZC3HAV1LQ96H79 300 aaKnown RBP16.6■□□□□ 0.25
CAPN1-203ENST00000525013 FOXC2Q99958 501 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 LAT2Q9GZY6 243 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 GLRX2Q9NS18 164 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 C6orf203Q9P0P8 240 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-203ENST00000525013 BTNL2Q9UIR0 455 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 GPR45Q9Y5Y3 372 aa16.6■□□□□ 0.25
CAPN1-203ENST00000525013 SETD2Q9BYW2 2564 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-203ENST00000525013 ACANP16112 2415 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 SS18L1O75177 396 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-203ENST00000525013 RAF1P04049 648 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 PGRP06401 933 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 IL12AP29459 219 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 SLC7A1P30825 629 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 HPCAP84074 193 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 SKP2Q13309 424 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 KEAP1Q14145 624 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 ANKRD34AQ69YU3 496 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 TYW3Q6IPR3 259 aaKnown RBP16.59■□□□□ 0.25
CAPN1-203ENST00000525013 ZNF621Q6ZSS3 439 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 RNF130Q86XS8 419 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 CPNE4Q96A23 557 aaPredicted RBP16.59■□□□□ 0.25
CAPN1-203ENST00000525013 ARL8AQ96BM9 186 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 ZNF524Q96C55 264 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 MARK4Q96L34 752 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 INPP5KQ9BT40 448 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 C12orf49Q9H741 205 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 PLEKHF2Q9H8W4 249 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 PLSCR4Q9NRQ2 329 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 C2CD3Q4AC94 2353 aa16.59■□□□□ 0.25
CAPN1-203ENST00000525013 KIAA0513O60268 411 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 NTN1O95631 604 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 C1QCP02747 245 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 GSNP06396 782 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 IDO1P14902 403 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 CCKARP32238 428 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 SELENBP1Q13228 472 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 MAPK14Q16539 360 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 ZNF239Q16600 458 aaKnown RBP16.58■□□□□ 0.24
CAPN1-203ENST00000525013 TIGD2Q4W5G0 525 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 SLC9B1Q4ZJI4 515 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 HMGN2P46Q86SG4 172 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 STK32CQ86UX6 486 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 ZNF619Q8N2I2 560 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 ZFP90Q8TF47 636 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 SRXN1Q9BYN0 137 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 POLE3Q9NRF9 147 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 ARID1AO14497 2285 aa16.58■□□□□ 0.24
CAPN1-203ENST00000525013 HMGN4O00479 90 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 SLC22A3O75751 556 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 PGCP20142 388 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 AGTR1P30556 359 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 CDKN2CP42773 168 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 ANXA11P50995 505 aaKnown RBP16.57■□□□□ 0.24
CAPN1-203ENST00000525013 SESN3P58005 492 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 LRRC74AQ0VAA2 488 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 FUT5Q11128 374 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 RNPS1Q15287 305 aaKnown RBP16.57■□□□□ 0.24
CAPN1-203ENST00000525013 SLC25A53Q5H9E4 307 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 TMEM201Q5SNT2 666 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 FRRS1Q6ZNA5 592 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 FCRLAQ7L513 359 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 GLB1L3Q8NCI6 653 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms