RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 IFNA10P01566 189 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 ANXA2P07355 339 aaKnown RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 CCR8P51685 355 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 NUTF2P61970 127 aaKnown RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 PITPNAQ00169 270 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 PLEKHN1Q494U1 663 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 TIGD5Q53EQ6 642 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 BAIAP2L2Q6UXY1 529 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 ESPNLQ6ZVH7 1005 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 THEM5Q8N1Q8 247 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 OR4F15Q8NGB8 312 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 OR5J2Q8NH18 312 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 SMIM4Q8WVI0 70 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 OCSTAMPQ9BR26 566 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 LAMA3Q16787 3333 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 PDCD11Q14690 1871 aaKnown RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 C1orf226A1L170 272 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 TRAPPC13A5PLN9 417 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 VSTM5A8MXK1 200 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 LOC730098B7Z3J9 87 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 CLDN5O00501 218 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 SCAMP2O15127 329 aaKnown RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 F2P00734 622 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 PDYNP01213 254 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 SAGP10523 405 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 ADRB3P13945 408 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 XPAP23025 273 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 SLC11A2P49281 568 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 LUMP51884 338 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 SORDQ00796 357 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 HGFACQ04756 655 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 IL10RAQ13651 578 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 TNFAIP1Q13829 316 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 SLC25A35Q3KQZ1 300 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 CTSL3PQ5NE16 218 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 ARTNQ5T4W7 220 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 LIPJQ5W064 366 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 TCEAL6Q6IPX3 200 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 SBSNQ6UWP8 590 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 CTU1Q7Z7A3 348 aaKnown RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 SCD5Q86SK9 330 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 OR4A4PQ8NGN8 299 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 GEMIN6Q8WXD5 167 aaKnown RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 MYLIPQ8WY64 445 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 ATG4CQ96DT6 458 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 CNTNAP3BQ96NU0 1288 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 GPN1Q9HCN4 374 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 KCND3Q9UK17 655 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 A0A087X0M5 115 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 TRAV14DV4A0A0A6YYC5 116 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 A0A1B0GX30 115 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 ITGA10O75578 1167 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 CBR3O75828 277 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 RGS9O75916 674 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 GOSR1O95249 250 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 RHOP08100 348 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 CTSHP09668 335 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 ELNP15502 786 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 HIST1H1BP16401 226 aaKnown RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 GALP22466 123 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 MECP2P51608 486 aaKnown RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 ART1P52961 327 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 GMFBP60983 142 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 FNDC3BQ53EP0 1204 aaKnown RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 HEPHL1Q6MZM0 1159 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 ACSM5Q6NUN0 579 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 JMJD6Q6NYC1 403 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-217ENST00000522117 ZNF813Q6ZN06 617 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 LRRC52Q8N7C0 313 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 OR4Q3Q8NH05 313 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 SORCS1Q8WY21 1168 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 ZNF649Q9BS31 505 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 ULBP1Q9BZM6 244 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 TMEM231Q9H6L2 316 aa11.22□□□□□ -0.61
SPIDR-217ENST00000522117 RFPL4AA6NLU0 287 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 RFPL4AL1F8VTS6 287 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 BLOC1S5-TXNDC5H3BN57 136 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 MED6O75586 246 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 PIRTP0C851 137 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 VSIG10L2P0DP72 767 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 PMELP40967 661 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 ACSM1Q08AH1 577 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 CLN3Q13286 438 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 GAB1Q13480 694 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 VGLL4Q14135 290 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 ZNF239Q16600 458 aaKnown RBP11.21□□□□□ -0.61
SPIDR-217ENST00000522117 PAPD4Q6PIY7 484 aaKnown RBP11.21□□□□□ -0.61
SPIDR-217ENST00000522117 FBXO46Q6PJ61 603 aaPredicted RBP11.21□□□□□ -0.61
SPIDR-217ENST00000522117 SMARCD3Q6STE5 483 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 SSX6Q7RTT6 188 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 GPRIN1Q7Z2K8 1008 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 ZNF461Q8TAF7 563 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 SMAP2Q8WU79 429 aaPredicted RBP11.21□□□□□ -0.61
SPIDR-217ENST00000522117 S100PBPQ96BU1 408 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 APIPQ96GX9 242 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 CDKN2AIPNLQ96HQ2 116 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 ZNF559Q9BR84 538 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 METTL9Q9H1A3 318 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 UQCC1Q9NVA1 299 aa11.21□□□□□ -0.61
SPIDR-217ENST00000522117 STOX2Q9P2F5 926 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms