RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 RAET1LQ5VY80 246 aa8.52□□□□□ -1.05
CLK4-209ENST00000521621 REEP3Q6NUK4 255 aa8.52□□□□□ -1.05
CLK4-209ENST00000521621 C8orf82Q6P1X6 216 aaPredicted RBP8.52□□□□□ -1.05
CLK4-209ENST00000521621 GRINAQ7Z429 371 aa8.52□□□□□ -1.05
CLK4-209ENST00000521621 DHDDSQ86SQ9 333 aa8.52□□□□□ -1.05
CLK4-209ENST00000521621 OR5M9Q8NGP3 310 aa8.52□□□□□ -1.05
CLK4-209ENST00000521621 CCDC106Q9BWC9 280 aa8.52□□□□□ -1.05
CLK4-209ENST00000521621 KAT8Q9H7Z6 458 aaKnown RBP8.52□□□□□ -1.05
CLK4-209ENST00000521621 TIGARQ9NQ88 270 aa8.52□□□□□ -1.05
CLK4-209ENST00000521621 MKLN1Q9UL63 735 aa8.52□□□□□ -1.05
CLK4-209ENST00000521621 ZNF232Q9UNY5 417 aa8.52□□□□□ -1.05
CLK4-209ENST00000521621 CARD8Q9Y2G2 431 aa8.52□□□□□ -1.05
CLK4-209ENST00000521621 FBP2O00757 339 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 NDUFAB1O14561 156 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 OIP5O43482 229 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 FMO6PO60774 539 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 SS18L1O75177 396 aaPredicted RBP8.51□□□□□ -1.05
CLK4-209ENST00000521621 CD8BP10966 210 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 CRATP43155 626 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 HCFC1P51610 2035 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 LARS2Q15031 903 aaKnown RBP8.51□□□□□ -1.05
CLK4-209ENST00000521621 TOMM20Q15388 145 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 ADRM1Q16186 407 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 C6orf10Q5SRN2 563 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 CBLN3Q6UW01 205 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 PLEKHM3Q6ZWE6 761 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 ARPINQ7Z6K5 226 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 PIGWQ7Z7B1 504 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 RETREG3Q86VR2 466 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 PCYOX1LQ8NBM8 494 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 HIPK4Q8NE63 616 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 OR6S1Q8NH40 331 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 OR2V1Q8NHB1 315 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 TMEM19Q96HH6 336 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 KLHL15Q96M94 604 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 POLR2J2Q9GZM3 115 aaKnown RBP8.51□□□□□ -1.05
CLK4-209ENST00000521621 POLR2J3Q9H1A7 115 aaKnown RBP8.51□□□□□ -1.05
CLK4-209ENST00000521621 KCNJ16Q9NPI9 418 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 TRAPPC4Q9Y296 219 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 ZNF443Q9Y2A4 671 aaPredicted RBP8.51□□□□□ -1.05
CLK4-209ENST00000521621 ESPL1Q14674 2120 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 GMNCA6NCL1 334 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 C9JVG2 144 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 DVL2O14641 736 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 DRD4P21917 467 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 HTR1EP28566 365 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 PCGF2P35227 344 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 VEZF1Q14119 521 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 QPRTQ15274 297 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 SPATS1Q496A3 300 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 GTDC1Q4AE62 458 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 GTF2IRD2BQ6EKJ0 949 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 C3orf33Q6P1S2 294 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 ERICH5Q6P6B1 374 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 C5orf46Q6UWT4 87 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 SPATA21Q7Z572 469 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 GTF2IRD2Q86UP8 949 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 LSMEM1Q8N8F7 131 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 TNIP2Q8NFZ5 429 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 OR52P1PQ8NH57 321 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 FBXO27Q8NI29 283 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 CA5BP1Q8WTZ4 195 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 CPNE4Q96A23 557 aaPredicted RBP8.51□□□□□ -1.05
CLK4-209ENST00000521621 RNF145Q96MT1 663 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 THUMPD3Q9BV44 507 aaKnown RBP8.51□□□□□ -1.05
CLK4-209ENST00000521621 SERINC1Q9NRX5 453 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 GID8Q9NWU2 228 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 HDGFL3Q9Y3E1 203 aa8.51□□□□□ -1.05
CLK4-209ENST00000521621 HNRNPRO43390 633 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 PGM3O95394 542 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 PMS2P2O95744 297 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 LSP1P33241 339 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 RFX3P48380 749 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 ZNF136P52737 540 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 SUCLG1P53597 346 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 RNPS1Q15287 305 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 ZNF239Q16600 458 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 OR5M10Q6IEU7 315 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 ZNF836Q6ZNA1 936 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 KRT73Q86Y46 540 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 SLC43A2Q8N370 569 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 RASSF5Q8WWW0 418 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 SDCCAG3Q96C92 435 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 OTUB1Q96FW1 271 aaPredicted RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 GMPPAQ96IJ6 420 aaPredicted RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 GPATCH1Q9BRR8 931 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 PINK1Q9BXM7 581 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 POTEKPQ9BYX7 375 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 CACYBPQ9HB71 228 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 ELOVL5Q9NYP7 299 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 CAPN7Q9Y6W3 813 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 CENPVL1A0A0U1RR11 272 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 SLC22A20A6NK97 555 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 FXYD1O00168 92 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 EFNA2O43921 213 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 SNX3O60493 162 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 C1QCP02747 245 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 ME2P23368 584 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 ACAA2P42765 397 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 SLC1A3P43003 542 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms