RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 CIDECQ96AQ7 238 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 GIMAP5Q96F15 307 aa8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 JMJD8Q96S16 334 aa8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 CCT7Q99832 543 aa8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 TRMOQ9BU70 441 aa8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 PINK1Q9BXM7 581 aa8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 TBL1XR1Q9BZK7 514 aa8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 CDIP1Q9H305 208 aa8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 REEP4Q9H6H4 257 aa8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 EQTNQ9NQ60 294 aa8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 BEX4Q9NWD9 120 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 KLHL28Q9NXS3 571 aa8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 ELOVL5Q9NYP7 299 aa8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 C6orf203Q9P0P8 240 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 BAIAP2L1Q9UHR4 511 aa8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 EIF3LQ9Y262 564 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-221ENST00000520339 KIAA1549Q9HCM3 1950 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 A0A087WZY1 265 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 H3BML4 177 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 C16orf97H3BN30 126 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 COPEO14579 308 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 TRIM13O60858 407 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 AQP8O94778 261 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 OXSR1O95747 527 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 FGF4P08620 206 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 FREM3P0C091 2139 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 LINC00032P0C843 101 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 ACP2P11117 423 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 POU2F1P14859 743 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 KRT4P19013 534 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 TBXA2RP21731 343 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 CRYGSP22914 178 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 LOXP28300 417 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 CCKARP32238 428 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 SLC6A8P48029 635 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 PRKAG1P54619 331 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 MANFP55145 182 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 RPS3AP61247 264 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 SIRPAP78324 504 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 FGFBP1Q14512 234 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 PON3Q15166 354 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 UGT3A2Q3SY77 523 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 VPS26BQ4G0F5 336 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 RFTN2Q52LD8 501 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 ZCCHC12Q6PEW1 402 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 GGNQ86UU5 652 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 C4orf33Q8N1A6 199 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 GTPBP8Q8N3Z3 284 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 CDRT4Q8N9R6 151 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 GPR151Q8TDV0 419 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 PPCDCQ96CD2 204 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 ZBED6CLQ96FA7 236 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 ADGRG7Q96K78 797 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 MARK4Q96L34 752 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 TSSK3Q96PN8 268 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 FAM111AQ96PZ2 611 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 SLC39A3Q9BRY0 314 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 IFT22Q9H7X7 185 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 ACSS1Q9NUB1 689 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 SH3BP4Q9P0V3 963 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 MID2Q9UJV3 735 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 ADAM21Q9UKJ8 722 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 DNAJC15Q9Y5T4 150 aa8.31□□□□□ -1.08
CTNNA1-221ENST00000520339 A0A1W2PRB8 838 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 H0YHG0 523 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 LSM1O15116 133 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 ADAMDEC1O15204 470 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 GMFGO60234 142 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 KCNK2O95069 426 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 CHRNGP07510 517 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 BCKDHAP12694 445 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 ZNF17P17021 662 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 IL11P20809 199 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 FPR2P25090 351 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 PSMA4P25789 261 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 LCN1P31025 176 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 NKX6-1P78426 367 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 PCLAFQ15004 111 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 ACKR1Q16570 336 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 SGCBQ16585 318 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 DUSP5Q16690 384 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 CTU2Q2VPK5 515 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 SHEQ5VZ18 495 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 KANK2Q63ZY3 851 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 MFSD12Q6NUT3 480 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 SLC16A11Q8NCK7 471 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 OR6Y1Q8NGX8 325 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 CLHC1Q8NHS4 586 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 ZFP28Q8NHY6 868 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 ACTRT2Q8TDY3 377 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 SLC9A6Q92581 669 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 C16orf58Q96GQ5 468 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 NPAS1Q99742 590 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 PIP5K1AQ99755 562 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 KLHDC3Q9BQ90 382 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 IQCGQ9H095 443 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 HHATLQ9HCP6 504 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 PLSCR4Q9NRQ2 329 aa8.3□□□□□ -1.08
CTNNA1-221ENST00000520339 SIRT3Q9NTG7 399 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms