RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 CMC2Q9NRP2 79 aa23.74■■□□□ 1.39
COL13A1-213ENST00000520267 ERVK-19Q9WJR5 959 aa23.74■■□□□ 1.39
COL13A1-213ENST00000520267 IGHV5-51A0A0C4DH38 117 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 SLC35F4A4IF30 521 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 CLDN4O14493 209 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 CELP19835 753 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 PRPF38BQ5VTL8 546 aaKnown RBP23.73■■□□□ 1.39
COL13A1-213ENST00000520267 GDPD3Q7L5L3 318 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 KLBQ86Z14 1044 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 KISS1RQ969F8 398 aaPredicted RBP23.73■■□□□ 1.39
COL13A1-213ENST00000520267 MIXL1Q9H2W2 232 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 UCK1Q9HA47 277 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 ABCB9Q9NP78 766 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.73■■□□□ 1.39
COL13A1-213ENST00000520267 MUTYHQ9UIF7 546 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 PLCL2Q9UPR0 1127 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 GSTK1Q9Y2Q3 226 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 TRDV1A0A1B0GX56 115 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 C12orf71A8MTZ7 269 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 AKAP8O43823 692 aaKnown RBP23.73■■□□□ 1.39
COL13A1-213ENST00000520267 PAICSP22234 425 aaKnown RBP23.73■■□□□ 1.39
COL13A1-213ENST00000520267 FNTBP49356 437 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 CSTF1Q05048 431 aaKnown RBP23.73■■□□□ 1.39
COL13A1-213ENST00000520267 FGFBP1Q14512 234 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 ZNF141Q15928 474 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 ALG10BQ5I7T1 473 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 GATAD2AQ86YP4 633 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 TMEM99Q8N816 258 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 SLC37A3Q8NCC5 494 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 ZNF426Q9BUY5 554 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 TRIM2Q9C040 744 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 SOHLH2Q9NX45 425 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 LRIT1Q9P2V4 623 aa23.73■■□□□ 1.39
COL13A1-213ENST00000520267 FAM86C2PA6NEL3 165 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 NPIPB9F8W1W9 429 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 HCN1O60741 890 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 PRAMEF2O60811 474 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 CT45A8P0DMV1 189 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 CT45A9P0DMV2 189 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 ZNF79Q15937 498 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 DEFB133Q30KQ1 61 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 KLHL12Q53G59 568 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 CT45A2Q5DJT8 189 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 ZNF362Q5T0B9 420 aaPredicted RBP23.72■■□□□ 1.39
COL13A1-213ENST00000520267 VASNQ6EMK4 673 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 OR8H2Q8N162 312 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 ARIH2OSQ8N7S6 290 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 C16orf52Q8NHV5 167 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 TNFRSF13CQ96RJ3 184 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 TBX5Q99593 518 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 HDHD5Q9BXW7 423 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.72■■□□□ 1.39
COL13A1-213ENST00000520267 SPRTNQ9H040 489 aaPredicted RBP23.72■■□□□ 1.39
COL13A1-213ENST00000520267 Q9N2J8 555 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 BLACEA4D250 179 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 CAV3P56539 151 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 NDUFAF6Q330K2 333 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 DESI1Q6ICB0 168 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 LSMEM1Q8N8F7 131 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 OR10A5Q9H207 317 aa23.72■■□□□ 1.39
COL13A1-213ENST00000520267 PRR23D1E9PI22 279 aaPredicted RBP23.71■■□□□ 1.39
COL13A1-213ENST00000520267 PPP1R3DO95685 299 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 PRR23D2P0DMB1 279 aaPredicted RBP23.71■■□□□ 1.39
COL13A1-213ENST00000520267 POU3F3P20264 500 aaPredicted RBP23.71■■□□□ 1.39
COL13A1-213ENST00000520267 INSL4Q14641 139 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 COL13A1Q5TAT6 717 aaPredicted RBP23.71■■□□□ 1.39
COL13A1-213ENST00000520267 CADM2Q8N3J6 435 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 ACBD7Q8N6N7 88 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 OR51Q1Q8NH59 317 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 ADAMTS18Q8TE60 1221 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 TIMP4Q99727 224 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 A0A1W2PQL4 384 aaPredicted RBP23.71■■□□□ 1.39
COL13A1-213ENST00000520267 CCDC182A6NF36 153 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 NOS3P29474 1203 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 ATP12AP54707 1039 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 DEFA1P59665 94 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 DEFA3P59666 94 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 COPZ1P61923 177 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 FHL1Q13642 323 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 KIRREL2Q6UWL6 708 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 OAFQ86UD1 273 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 ATP6V1C2Q8NEY4 427 aa23.71■■□□□ 1.39
COL13A1-213ENST00000520267 AQP9O43315 295 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 SSX4O60224 188 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 REM1O75628 298 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 RBM34P42696 430 aaKnown RBP23.7■■□□□ 1.38
COL13A1-213ENST00000520267 FUT7Q11130 342 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 NKAIN2Q5VXU1 208 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 C17orf82Q86X59 251 aaPredicted RBP23.7■■□□□ 1.38
COL13A1-213ENST00000520267 BCORP1Q8N888 145 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 ALG8Q9BVK2 526 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 OR51V1Q9H2C8 321 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 MCCC2Q9HCC0 563 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 SACM1LQ9NTJ5 587 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 TBC1D24Q9ULP9 559 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 USP34Q70CQ2 3546 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 MN1Q10571 1320 aaPredicted RBP23.7■■□□□ 1.38
COL13A1-213ENST00000520267 GABRPO00591 440 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 GNB5O14775 395 aa23.7■■□□□ 1.38
COL13A1-213ENST00000520267 IFNA16P05015 189 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms