RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 CAMK2BQ13554 666 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 FGFBP1Q14512 234 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 EBPQ15125 230 aaKnown RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.3□□□□□ -0.28
CLN8-204ENST00000519254 BTBD16Q32M84 506 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 KIRREL2Q6UWL6 708 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 WDR88Q6ZMY6 472 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 PTCHD4Q6ZW05 846 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 MBOAT2Q6ZWT7 520 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 PPP1R32Q7Z5V6 425 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 LSRQ86X29 649 aaPredicted RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 CLVS1Q8IUQ0 354 aaPredicted RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 ZNF614Q8N883 585 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 APCDD1LQ8NCL9 501 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 OR4C3Q8NH37 302 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 PIGXQ8TBF5 258 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 THAP3Q8WTV1 239 aaPredicted RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 IPCEF1Q8WWN9 437 aaPredicted RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 MUL1Q969V5 352 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 VMP1Q96GC9 406 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 FAM46AQ96IP4 442 aaKnown RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 WWTR1Q9GZV5 400 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 EVA1AQ9H8M9 152 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 LIN28AQ9H9Z2 209 aaKnown RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 CCNB1IP1Q9NPC3 277 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 FKBP14Q9NWM8 211 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 DNAJB12Q9NXW2 375 aaKnown RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 CNIH4Q9P003 139 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 TESQ9UGI8 421 aaKnown RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 TERTO14746 1132 aaKnown RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 KLF4O43474 513 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 RGS10O43665 173 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 PIP5K1CO60331 668 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 MRPS14O60783 128 aaKnown RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 ACAA2P42765 397 aaKnown RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 GPR143P51810 404 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 NUDT6P53370 316 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 IL10RAQ13651 578 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 SSPNQ14714 243 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 HSDL2Q6YN16 418 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 AHSA2Q719I0 299 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 RRM2BQ7LG56 351 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 PRSS48Q7RTY5 328 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 NRMQ8IXM6 262 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 IQCF1Q8N6M8 205 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 OR11G2Q8NGC1 345 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 FAR1Q8WVX9 515 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 GGHQ92820 318 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 ADIPOR1Q96A54 375 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 PLA2G12AQ9BZM1 189 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 ZNF700Q9H0M5 742 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 NXF5Q9H1B4 397 aaKnown RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 GPN2Q9H9Y4 310 aaPredicted RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 AMBNQ9NP70 447 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 IL17BQ9UHF5 180 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 ZNF223Q9UK11 482 aaPredicted RBP13.3□□□□□ -0.28
CLN8-204ENST00000519254 COMMD3-BMI1R4GMX3 469 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 NSG1A0A0A6YYJ2 146 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 TRABD2BA6NFA1 517 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 OR6C76A6NM76 312 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.29□□□□□ -0.28
CLN8-204ENST00000519254 MASP2O00187 686 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 MPZL2O60487 215 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 INMTO95050 263 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 CELA2AP08217 269 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 DCKP27707 260 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 MAP2K4P45985 399 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 GIPRP48546 466 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 MASP1P48740 699 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 NR0B1P51843 470 aaKnown RBP13.29□□□□□ -0.28
CLN8-204ENST00000519254 PSMD4P55036 377 aaKnown RBP13.29□□□□□ -0.28
CLN8-204ENST00000519254 SNRPGP62308 76 aaKnown RBP13.29□□□□□ -0.28
CLN8-204ENST00000519254 RNF4P78317 190 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 CDK5Q00535 292 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 TUBA3CQ13748 450 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 GINS1Q14691 196 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 GPR107Q5VW38 600 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 ACSM5Q6NUN0 579 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 IGF2-ASQ6U949 168 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 PRR22Q8IZ63 422 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 POGLUT1Q8NBL1 392 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 KIAA1143Q96AT1 154 aaPredicted RBP13.29□□□□□ -0.28
CLN8-204ENST00000519254 ISOC1Q96CN7 298 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 NXPE2Q96DL1 559 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 ZNF559Q9BR84 538 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 SEMA4CQ9C0C4 833 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 DSN1Q9H410 356 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 EGLN3Q9H6Z9 239 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 ZNF160Q9HCG1 818 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 FLRT3Q9NZU0 649 aa13.29□□□□□ -0.28
CLN8-204ENST00000519254 CLCA1A8K7I4 914 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 ZNF701M0R085 212 aaPredicted RBP13.28□□□□□ -0.28
CLN8-204ENST00000519254 DXOO77932 396 aaKnown RBP13.28□□□□□ -0.28
CLN8-204ENST00000519254 LIPCP11150 499 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 PTNP21246 168 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 FPR3P25089 353 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 GP2P55259 537 aaKnown RBP13.28□□□□□ -0.28
CLN8-204ENST00000519254 RTP5Q14D33 572 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 KLHL26Q53HC5 615 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms