RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 B4E171 279 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 RFPL3O75679 317 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 HNRNPCP07910 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
SLIT3-204ENST00000518140 HPGDP15428 266 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 MAKP20794 623 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 GSTM3P21266 225 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 TSPAN7P41732 249 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 PLCXD2Q0VAA5 305 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 GTF2IRD2BQ6EKJ0 949 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 ZNF550Q7Z398 422 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 GTF2IRD2Q86UP8 949 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 LSMEM1Q8N8F7 131 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 PHOSPHO1Q8TCT1 267 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 PLEKHA8Q96JA3 519 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 MEPEQ9NQ76 525 aaPredicted RBP21.43■■□□□ 1.02
SLIT3-204ENST00000518140 CARD8Q9Y2G2 431 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 TPRKBQ9Y3C4 175 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 SCDO00767 359 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 BCL10O95999 233 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 ZNF12P17014 697 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 TBXA2RP21731 343 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 HSDL2Q6YN16 418 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 FAM210AQ96ND0 272 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 TRIM2Q9C040 744 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 PARD6AQ9NPB6 346 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 CHCHD3Q9NX63 227 aaKnown RBP21.43■■□□□ 1.02
SLIT3-204ENST00000518140 SCN3BQ9NY72 215 aa21.43■■□□□ 1.02
SLIT3-204ENST00000518140 PPIEQ9UNP9 301 aaKnown RBP21.43■■□□□ 1.02
SLIT3-204ENST00000518140 EP300Q09472 2414 aaPredicted RBP21.42■■□□□ 1.02
SLIT3-204ENST00000518140 OTOGLQ3ZCN5 2332 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 TMEM200CA6NKL6 621 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 GNB5O14775 395 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 UMODP07911 640 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 NGFRP08138 427 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 FPR3P25089 353 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 IL12BP29460 328 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 CDK5Q00535 292 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 ZNF517Q6ZMY9 492 aaPredicted RBP21.42■■□□□ 1.02
SLIT3-204ENST00000518140 RASSF6Q6ZTQ3 369 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 BCDIN3DQ7Z5W3 292 aaKnown RBP21.42■■□□□ 1.02
SLIT3-204ENST00000518140 SLC34A3Q8N130 599 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 ZNF527Q8NB42 609 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 FAM71CQ8NEG0 241 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 SNRNP27Q8WVK2 155 aaKnown RBP21.42■■□□□ 1.02
SLIT3-204ENST00000518140 LRFN5Q96NI6 719 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 DPH1Q9BZG8 443 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 EVA1AQ9H8M9 152 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 ZBTB20Q9HC78 741 aaPredicted RBP21.42■■□□□ 1.02
SLIT3-204ENST00000518140 PALMDQ9NP74 551 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 TVP23BQ9NYZ1 205 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 IL20RAQ9UHF4 553 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 GPN3Q9UHW5 284 aaPredicted RBP21.42■■□□□ 1.02
SLIT3-204ENST00000518140 MRTO4Q9UKD2 239 aaKnown RBP21.42■■□□□ 1.02
SLIT3-204ENST00000518140 SLC35A3Q9Y2D2 325 aa21.42■■□□□ 1.02
SLIT3-204ENST00000518140 KLF7O75840 302 aaPredicted RBP21.41■■□□□ 1.02
SLIT3-204ENST00000518140 ADH7P40394 386 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 BMXP51813 675 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 MVKQ03426 396 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 ALG10BQ5I7T1 473 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 CLEC12AQ5QGZ9 265 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 AHSA2Q719I0 299 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 MARCH3Q86UD3 253 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 COX4I2Q96KJ9 171 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 LPAR4Q99677 370 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 WDR54Q9H977 334 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 TRBV11-1A0A0K0K1C0 115 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 A0A1W2PNU3 283 aaPredicted RBP21.41■■□□□ 1.02
SLIT3-204ENST00000518140 SYNDIG1LA6NDD5 238 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 CHP2O43745 196 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 IFI30P13284 250 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 SKP2Q13309 424 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 ZSWIM7Q19AV6 140 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 ISXQ2M1V0 245 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 RAB11FIP2Q7L804 512 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 TCEANCQ8N8B7 351 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 SLC35B4Q969S0 331 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 TOR4AQ9NXH8 423 aa21.41■■□□□ 1.02
SLIT3-204ENST00000518140 PTRH2Q9Y3E5 179 aaKnown RBP21.41■■□□□ 1.02
SLIT3-204ENST00000518140 PRKYO43930 277 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 GMFGO60234 142 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 UBL4AP11441 157 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 PCMT1P22061 227 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 STAT5AP42229 794 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 MAP2K4P45985 399 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 DCAF12Q5T6F0 453 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 C17orf47Q8NEP4 570 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 TRUB1Q8WWH5 349 aaKnown RBP21.4■■□□□ 1.02
SLIT3-204ENST00000518140 GGHQ92820 318 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 PSORS1C1Q9UIG5 152 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 GTPBP1O00178 669 aaKnown RBP21.4■■□□□ 1.02
SLIT3-204ENST00000518140 WWP2O00308 870 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 MT-ND2P03891 347 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 SLC26A5P58743 744 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 EMX1Q04741 257 aaPredicted RBP21.4■■□□□ 1.02
SLIT3-204ENST00000518140 PRKCDQ05655 676 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 CASP12Q6UXS9 341 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 RNF113BQ8IZP6 322 aaKnown RBP21.4■■□□□ 1.02
SLIT3-204ENST00000518140 SH3YL1Q96HL8 342 aaPredicted RBP21.4■■□□□ 1.02
SLIT3-204ENST00000518140 ENKD1Q9H0I2 346 aa21.4■■□□□ 1.02
SLIT3-204ENST00000518140 PLCXD1Q9NUJ7 323 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms