RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 RANGRFQ9HD47 186 aaPredicted RBP2.55□□□□□ -2
SKP1-204ENST00000517691 SLC22A11Q9NSA0 550 aa2.55□□□□□ -2
SKP1-204ENST00000517691 SLC6A13Q9NSD5 602 aa2.55□□□□□ -2
SKP1-204ENST00000517691 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.55□□□□□ -2
SKP1-204ENST00000517691 RLIMQ9NVW2 624 aa2.55□□□□□ -2
SKP1-204ENST00000517691 FAM118AQ9NWS6 357 aa2.55□□□□□ -2
SKP1-204ENST00000517691 SENP1Q9P0U3 644 aa2.55□□□□□ -2
SKP1-204ENST00000517691 KLHL9Q9P2J3 617 aa2.55□□□□□ -2
SKP1-204ENST00000517691 COPG2Q9UBF2 871 aa2.55□□□□□ -2
SKP1-204ENST00000517691 CTSFQ9UBX1 484 aa2.55□□□□□ -2
SKP1-204ENST00000517691 HAO1Q9UJM8 370 aa2.55□□□□□ -2
SKP1-204ENST00000517691 VPS4AQ9UN37 437 aa2.55□□□□□ -2
SKP1-204ENST00000517691 CMAHPQ9Y471 501 aa2.55□□□□□ -2
SKP1-204ENST00000517691 SLC22A7Q9Y694 548 aa2.55□□□□□ -2
SKP1-204ENST00000517691 U3KQV3 271 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ARHGEF17Q96PE2 2063 aaPredicted RBP2.55□□□□□ -2
SKP1-204ENST00000517691 ACACBO00763 2458 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ZZEF1O43149 2961 aa2.55□□□□□ -2
SKP1-204ENST00000517691 LOC100509620A0A075B734 347 aa2.54□□□□□ -2
SKP1-204ENST00000517691 UQCRHLA0A096LP55 91 aa2.54□□□□□ -2
SKP1-204ENST00000517691 A0A1B0GTL3 188 aa2.54□□□□□ -2
SKP1-204ENST00000517691 GXYLT2A0PJZ3 443 aa2.54□□□□□ -2
SKP1-204ENST00000517691 C5orf52A6NGY3 159 aa2.54□□□□□ -2
SKP1-204ENST00000517691 MBD3L5A6NJ08 208 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 ARGFXA6NJG6 315 aa2.54□□□□□ -2
SKP1-204ENST00000517691 NPIPB5A8MRT5 1133 aa2.54□□□□□ -2
SKP1-204ENST00000517691 C17orf100A8MU93 164 aa2.54□□□□□ -2
SKP1-204ENST00000517691 MAGEB17A8MXT2 336 aa2.54□□□□□ -2
SKP1-204ENST00000517691 H0YIG0 161 aa2.54□□□□□ -2
SKP1-204ENST00000517691 FOXE1O00358 373 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 MANBAO00462 879 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CHST10O43529 356 aa2.54□□□□□ -2
SKP1-204ENST00000517691 UGDHO60701 494 aa2.54□□□□□ -2
SKP1-204ENST00000517691 GALR3O60755 368 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 TRIM13O60858 407 aa2.54□□□□□ -2
SKP1-204ENST00000517691 B4GALT2O60909 372 aa2.54□□□□□ -2
SKP1-204ENST00000517691 SEMA7AO75326 666 aa2.54□□□□□ -2
SKP1-204ENST00000517691 JRKO75564 520 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CIB2O75838 187 aa2.54□□□□□ -2
SKP1-204ENST00000517691 OR4F21O95013 312 aa2.54□□□□□ -2
SKP1-204ENST00000517691 AGFG2O95081 481 aa2.54□□□□□ -2
SKP1-204ENST00000517691 NSA2O95478 260 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 PDYNP01213 254 aa2.54□□□□□ -2
SKP1-204ENST00000517691 KRT6AP02538 564 aa2.54□□□□□ -2
SKP1-204ENST00000517691 KRT6BP04259 564 aa2.54□□□□□ -2
SKP1-204ENST00000517691 S100A6P06703 90 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CAPN1P07384 714 aa2.54□□□□□ -2
SKP1-204ENST00000517691 UQCRHP07919 91 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CHRM2P08172 466 aa2.54□□□□□ -2
SKP1-204ENST00000517691 VIMP08670 466 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 RPS17P08708 135 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 HK1P19367 917 aa2.54□□□□□ -2
SKP1-204ENST00000517691 DRD5P21918 477 aa2.54□□□□□ -2
SKP1-204ENST00000517691 GSTM2P28161 218 aa2.54□□□□□ -2
SKP1-204ENST00000517691 HNRNPH1P31943 449 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 SSR2P43308 183 aa2.54□□□□□ -2
SKP1-204ENST00000517691 XCR1P46094 333 aa2.54□□□□□ -2
SKP1-204ENST00000517691 GSTM5P46439 218 aa2.54□□□□□ -2
SKP1-204ENST00000517691 KRT6CP48668 564 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CCL11P51671 97 aa2.54□□□□□ -2
SKP1-204ENST00000517691 PGDP52209 483 aa2.54□□□□□ -2
SKP1-204ENST00000517691 PRKAG1P54619 331 aa2.54□□□□□ -2
SKP1-204ENST00000517691 EMP2P54851 167 aa2.54□□□□□ -2
SKP1-204ENST00000517691 PKNOX1P55347 436 aa2.54□□□□□ -2
SKP1-204ENST00000517691 DNAJB13P59910 316 aa2.54□□□□□ -2
SKP1-204ENST00000517691 MAGOHP61326 146 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 RPS13P62277 151 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 CDC20Q12834 499 aa2.54□□□□□ -2
SKP1-204ENST00000517691 SLAMF1Q13291 335 aa2.54□□□□□ -2
SKP1-204ENST00000517691 PDE7AQ13946 482 aa2.54□□□□□ -2
SKP1-204ENST00000517691 FGFBP1Q14512 234 aa2.54□□□□□ -2
SKP1-204ENST00000517691 LARS2Q15031 903 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 NSDHLQ15738 373 aa2.54□□□□□ -2
SKP1-204ENST00000517691 IQCCQ4KMZ1 466 aa2.54□□□□□ -2
SKP1-204ENST00000517691 GAGE13Q4V321 117 aa2.54□□□□□ -2
SKP1-204ENST00000517691 TMEM35AQ53FP2 167 aa2.54□□□□□ -2
SKP1-204ENST00000517691 LBHQ53QV2 105 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 CXorf66Q5JRM2 361 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 KHDRBS2Q5VWX1 349 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 FRG2Q64ET8 278 aa2.54□□□□□ -2
SKP1-204ENST00000517691 OR4C11Q6IEV9 310 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CCDC144NLQ6NUI1 221 aa2.54□□□□□ -2
SKP1-204ENST00000517691 NIPAL1Q6NVV3 410 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ZNF529Q6P280 563 aa2.54□□□□□ -2
SKP1-204ENST00000517691 TEX38Q6PEX7 206 aa2.54□□□□□ -2
SKP1-204ENST00000517691 SCIMPQ6UWF3 145 aa2.54□□□□□ -2
SKP1-204ENST00000517691 FAM198BQ6UWH4 519 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ZCCHC23Q6ZST2 131 aa2.54□□□□□ -2
SKP1-204ENST00000517691 RAB43Q86YS6 212 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ZNF595Q8IYB9 648 aa2.54□□□□□ -2
SKP1-204ENST00000517691 LAS2Q8IYD9 372 aa2.54□□□□□ -2
SKP1-204ENST00000517691 PM20D2Q8IYS1 436 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CMTM4Q8IZR5 234 aa2.54□□□□□ -2
SKP1-204ENST00000517691 AMER3Q8N944 861 aa2.54□□□□□ -2
SKP1-204ENST00000517691 FAM47BQ8NA70 645 aa2.54□□□□□ -2
SKP1-204ENST00000517691 SLC16A11Q8NCK7 471 aa2.54□□□□□ -2
SKP1-204ENST00000517691 BHLHE23Q8NDY6 225 aa2.54□□□□□ -2
SKP1-204ENST00000517691 SRFBP1Q8NEF9 429 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 TMEM185AQ8NFB2 350 aa2.54□□□□□ -2
SKP1-204ENST00000517691 SLC24A4Q8NFF2 622 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms