RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TAF8Q7Z7C8 310 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 NRROSQ86YC3 692 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 KLHDC8BQ8IXV7 354 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 PRSS58Q8IYP2 241 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZFP82Q8N141 532 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 EID2Q8N6I1 236 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SAMD12Q8N8I0 201 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 KCTD6Q8NC69 237 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 REPS2Q8NFH8 660 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR7G2Q8NG99 324 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR2AP1Q8NGE2 309 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR51A7Q8NH64 312 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 M1APQ8TC57 530 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 CPT1CQ8TCG5 803 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 LRRC15Q8TF66 581 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 RSC1A1Q92681 617 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 GGHQ92820 318 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 EXTL1Q92935 676 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 ULK4Q96C45 1275 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 CMTM7Q96FZ5 175 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 NUDT11Q96G61 164 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC41A3Q96GZ6 507 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR2A7Q96R45 310 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 C11orf70Q9BRQ4 267 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 WDR83Q9BRX9 315 aaKnown RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 C11orf84Q9BUA3 381 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SF3B5Q9BWJ5 86 aaKnown RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SSBP3Q9BWW4 388 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 C1QTNF3Q9BXJ4 246 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 CACNG6Q9BXT2 260 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 ARL6Q9H0F7 186 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR2AG1Q9H205 316 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 ABCG5Q9H222 651 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SMOC1Q9H4F8 434 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 PRDM13Q9H4Q3 707 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 TASP1Q9H6P5 420 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 METTL17Q9H7H0 456 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLAMF7Q9NQ25 335 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SERHLQ9NQF3 203 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SDR39U1Q9NRG7 319 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC6A13Q9NSD5 602 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 NRBP2Q9NSY0 501 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZIM2Q9NZV7 527 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 TRPC4Q9UBN4 977 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR52A1Q9UKL2 312 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 IKZF3Q9UKT9 509 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 FZD10Q9ULW2 581 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 C19orf53Q9UNZ5 99 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 EXOGQ9Y2C4 368 aaKnown RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC35A3Q9Y2D2 325 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 PKP3Q9Y446 797 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 KPTNQ9Y664 436 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 TJP1Q07157 1748 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZFC3H1O60293 1989 aaKnown RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CCDC187A0A096LP49 1063 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 TRAV19A0A0A6YYK7 116 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 LOC102723532A0A0G2JNH3 316 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 A0A0U1RQS6 177 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 TCRBV16S1A1N1A0A5B0 115 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC5A10A0PJK1 596 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 XKRY2A2RUG3 117 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM238C9JI98 176 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF587BE7ETH6 402 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 C1QTNF3-AMACRE9PGA6 284 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ANHXE9PGG2 379 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 AQP7O14520 342 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 TGFB1I1O43294 461 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PPIHO43447 177 aaKnown RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CREBL2O60519 120 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CDC14BO60729 498 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 FZD7O75084 574 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 GLCEO94923 617 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 AP2A2O94973 939 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR2F2O95006 317 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR4F21O95013 312 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CDRT1O95170 752 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PDE8BO95263 885 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 METTL18O95568 372 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 SCGB1D2O95969 90 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 TRBC1P01850 177 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ALDOBP05062 364 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 RHOP08100 348 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ITGA5P08648 1049 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR8U8P0C7N1 319 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 C6P13671 934 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 NQO2P16083 231 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF20P17024 532 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 TYMPP19971 482 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 RAB5AP20339 215 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 CCNOP22674 350 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 AHCYP23526 432 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PTPN3P26045 913 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 RBMS1P29558 406 aaKnown RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR1E1P30953 314 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 FGF9P31371 208 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 HIBADHP31937 336 aaKnown RBP4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PIGAP37287 484 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 RFX3P48380 749 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC11A2P49281 568 aa4.47□□□□□ -1.69
HMGB1P19-201ENST00000517578 PPT1P50897 306 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms