RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 IMPDH1P20839 514 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 MAGP20916 626 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF10P21506 573 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TBXA2RP21731 343 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 ATP5F1P24539 256 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PTX3P26022 381 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 EPHA3P29320 983 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TTKP33981 857 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PIK3CBP42338 1070 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 BDKRB1P46663 353 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 IDH3AP50213 366 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 CDK9P50750 372 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 AQP5P55064 265 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 CDH11P55287 796 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PKNOX1P55347 436 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 ARF3P61204 181 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 RPS3AP61247 264 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 STXBP1P61764 594 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 HERVK_113P63132 956 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 EEF1A1P68104 462 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TXNL4AP83876 142 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 DGCR2P98153 550 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 MEF2AQ02078 507 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 EMX1Q04741 257 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 GALNT1Q10472 559 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 DUSP8Q13202 625 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 BIKQ13323 160 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 MED21Q13503 144 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 BMPR2Q13873 1038 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 CYLC2Q14093 348 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PCLAFQ15004 111 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 HERC3Q15034 1050 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 OR4D1Q15615 310 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 CHI3L2Q15782 390 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 EXT1Q16394 746 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 NDUFA9Q16795 377 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 ADPRMQ3LIE5 342 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 ANKDD1AQ495B1 522 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 GGTA1PQ4G0N0 100 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PIGGQ5H8A4 983 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TECRLQ5HYJ1 363 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 SH2D4BQ5SQS7 431 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 EEF1A1P5Q5VTE0 462 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TMIGD1Q6UXZ0 262 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 RNF165Q6ZSG1 346 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 FRMD7Q6ZUT3 714 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 BHLHA15Q7RTS1 189 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 OVCH2Q7RTZ1 564 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 CPEB2Q7Z5Q1 589 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 CMC1Q7Z7K0 106 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 AMIGO2Q86SJ2 522 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PATL1Q86TB9 770 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 THOC6Q86W42 341 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 ERI1Q8IV48 349 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PM20D2Q8IYS1 436 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 GCNT2Q8N0V5 402 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 CYP4Z2PQ8N1L4 340 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 ARHGEF39Q8N4T4 335 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 AFAP1L2Q8N4X5 818 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 LINC00482Q8N8I6 264 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 L3MBTL4Q8NA19 623 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TTC29Q8NA56 475 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 MFSD9Q8NBP5 474 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 CAMKVQ8NCB2 501 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 OR4M2Q8NGB6 313 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 NT5CQ8TCD5 201 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC13A3Q8WWT9 602 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC5A11Q8WWX8 675 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 STON2Q8WXE9 905 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TFAP2CQ92754 450 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TANKQ92844 425 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 UCN3Q969E3 161 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 NEIL2Q969S2 332 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 NXNL1Q96CM4 212 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 STARD4Q96DR4 205 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 MRRFQ96E11 262 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 L3HYPDHQ96EM0 354 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 METTL2AQ96IZ6 378 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PRAP1Q96NZ9 151 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 IL17FQ96PD4 163 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 OR4K3Q96R72 315 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PRR25Q96S07 402 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 DOK1Q99704 481 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TIMP4Q99727 224 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 EGFL8Q99944 293 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 AIF1LQ9BQI0 150 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC39A3Q9BRY0 314 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 NPLQ9BXD5 320 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 ERVK-6Q9BXR3 956 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TGIF2Q9GZN2 237 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PRDM14Q9GZV8 571 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 OPN3Q9H1Y3 402 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 POFUT1Q9H488 388 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 ALG9Q9H6U8 611 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 IL1RL2Q9HB29 575 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF304Q9HCX3 659 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 SIRT3Q9NTG7 399 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 CUTCQ9NTM9 273 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 DDX18Q9NVP1 670 aaKnown RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 MS4A12Q9NXJ0 267 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms