RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 PTH2RP49190 550 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 EMX2Q04743 252 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 MAD2L1Q13257 205 aaPredicted RBP11.85□□□□□ -0.51
PFDN1-206ENST00000514611 CBFBQ13951 182 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 QPRTQ15274 297 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 RNPS1Q15287 305 aaKnown RBP11.85□□□□□ -0.51
PFDN1-206ENST00000514611 GPR68Q15743 365 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 KRT71Q3SY84 523 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 TMEM201Q5SNT2 666 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 GTF2IRD2BQ6EKJ0 949 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 C6orf120Q7Z4R8 191 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 GTF2IRD2Q86UP8 949 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 ANKRD46Q86W74 232 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 GABRG1Q8N1C3 465 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 OR5W2Q8NH69 310 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 IGFBPL1Q8WX77 278 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 S100PBPQ96BU1 408 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 REXO5Q96IC2 774 aaKnown RBP11.85□□□□□ -0.51
PFDN1-206ENST00000514611 MRGPRX4Q96LA9 322 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 QRSL1Q9H0R6 528 aaKnown RBP11.85□□□□□ -0.51
PFDN1-206ENST00000514611 AKTIPQ9H8T0 292 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 ASIC5Q9NY37 505 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 GPR52Q9Y2T5 361 aa11.85□□□□□ -0.51
PFDN1-206ENST00000514611 SERINC4A6NH21 518 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 GJE1A6NN92 205 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 RNASET2O00584 256 aaKnown RBP11.84□□□□□ -0.51
PFDN1-206ENST00000514611 SMAD7O15105 426 aaKnown RBP11.84□□□□□ -0.51
PFDN1-206ENST00000514611 FCMRO60667 390 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 UGT2B17O75795 530 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 H6PDO95479 791 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 SERPINE1P05121 402 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 HEXAP06865 529 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 PABPC4LP0CB38 370 aaKnown RBP11.84□□□□□ -0.51
PFDN1-206ENST00000514611 SLC7A1P30825 629 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 NR1H2P55055 460 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 ABCE1P61221 599 aaKnown RBP11.84□□□□□ -0.51
PFDN1-206ENST00000514611 SKP2Q13309 424 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 SLC25A53Q5H9E4 307 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 WDR93Q6P2C0 686 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 BHLHB9Q6PI77 547 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 PLEKHM3Q6ZWE6 761 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.84□□□□□ -0.51
PFDN1-206ENST00000514611 ATG4DQ86TL0 474 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-206ENST00000514611 ZNF619Q8N2I2 560 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 TOR1AIP2Q8NFQ8 470 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 OR4A15Q8NGL6 344 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 RAB3IL1Q8TBN0 382 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 SORT1Q99523 831 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 PSD2Q9BQI7 771 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 TMEM204Q9BSN7 226 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 GSX2Q9BZM3 304 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 NMUR2Q9GZQ4 415 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 ZNF350Q9GZX5 532 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 OR10A4Q9H209 315 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 OR51I1Q9H343 314 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 FANCFQ9NPI8 374 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 TIGARQ9NQ88 270 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 ING1Q9UK53 422 aaPredicted RBP11.84□□□□□ -0.51
PFDN1-206ENST00000514611 MKLN1Q9UL63 735 aa11.84□□□□□ -0.51
PFDN1-206ENST00000514611 ETV2O00321 342 aaPredicted RBP11.83□□□□□ -0.52
PFDN1-206ENST00000514611 EIF4E2O60573 245 aaKnown RBP11.83□□□□□ -0.52
PFDN1-206ENST00000514611 SCN2BO60939 215 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 BCAS1O75363 584 aaPredicted RBP11.83□□□□□ -0.52
PFDN1-206ENST00000514611 STX11O75558 287 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 LY6G6DO95868 133 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 C1QCP02747 245 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 UBTFL6P0CB48 400 aaPredicted RBP11.83□□□□□ -0.52
PFDN1-206ENST00000514611 EDNRAP25101 427 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 PHC1P78364 1004 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 FUT5Q11128 374 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 ZNF141Q15928 474 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 MAPK14Q16539 360 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 ARHGAP11BQ3KRB8 267 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 TIGD2Q4W5G0 525 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 C3orf33Q6P1S2 294 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 TNFAIP8L2Q6P589 184 aaPredicted RBP11.83□□□□□ -0.52
PFDN1-206ENST00000514611 PRSS57Q6UWY2 283 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 C16orf62Q7Z3J2 963 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 HMGN2P46Q86SG4 172 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 OR8J2Q8NGG1 315 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 AKAP1Q92667 903 aaKnown RBP eCLIP11.83□□□□□ -0.522e-6■■■□□ 17
PFDN1-206ENST00000514611 OR5B2Q96R09 309 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 ZNF300Q96RE9 604 aaPredicted RBP11.83□□□□□ -0.52
PFDN1-206ENST00000514611 THUMPD3Q9BV44 507 aaKnown RBP11.83□□□□□ -0.52
PFDN1-206ENST00000514611 TMEM109Q9BVC6 243 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 DPY30Q9C005 99 aa11.83□□□□□ -0.52
PFDN1-206ENST00000514611 NIPBLQ6KC79 2804 aaeCLIP11.82□□□□□ -0.52
PFDN1-206ENST00000514611 DUXAA6NLW8 204 aa11.82□□□□□ -0.52
PFDN1-206ENST00000514611 ZNF814B7Z6K7 855 aa11.82□□□□□ -0.52
PFDN1-206ENST00000514611 C9JVG2 144 aa11.82□□□□□ -0.52
PFDN1-206ENST00000514611 HS3ST1O14792 307 aa11.82□□□□□ -0.52
PFDN1-206ENST00000514611 ANKRD28O15084 1053 aa11.82□□□□□ -0.52
PFDN1-206ENST00000514611 SMAD9O15198 467 aaKnown RBP11.82□□□□□ -0.52
PFDN1-206ENST00000514611 RGS16O15492 202 aaPredicted RBP11.82□□□□□ -0.52
PFDN1-206ENST00000514611 KIAA0513O60268 411 aa11.82□□□□□ -0.52
PFDN1-206ENST00000514611 PRKD3O94806 890 aa11.82□□□□□ -0.52
PFDN1-206ENST00000514611 SOX30O94993 753 aa11.82□□□□□ -0.52
PFDN1-206ENST00000514611 CPSF4O95639 269 aaKnown RBP11.82□□□□□ -0.52
PFDN1-206ENST00000514611 AK1P00568 194 aa11.82□□□□□ -0.52
PFDN1-206ENST00000514611 ADAP00813 363 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms