RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 DUXAA6NLW8 204 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 ETV2O00321 342 aaPredicted RBP13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 SMAD7O15105 426 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 ZNF264O43296 627 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 EIF4E2O60573 245 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 CNOT4O95628 575 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 AK1P00568 194 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 YES1P07947 543 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 G6PDP11413 515 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 UBL4AP11441 157 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 IL32P24001 234 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 SLC7A1P30825 629 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 RAC3P60763 192 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 CBFBQ13951 182 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 QPRTQ15274 297 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 SLC25A53Q5H9E4 307 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 SFRP5Q5T4F7 317 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 C3orf33Q6P1S2 294 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 NUFIP2Q7Z417 695 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 ATP6V1C2Q8NEY4 427 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 AKAP1Q92667 903 aaKnown RBP eCLIP13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 SDF2Q99470 211 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 USB1Q9BQ65 265 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 NGBQ9NPG2 151 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 ASIC5Q9NY37 505 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 NOP53Q9NZM5 478 aaKnown RBP13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 KLHL9Q9P2J3 617 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 DNHD1Q96M86 4753 aa13.08□□□□□ -0.32
CCHCR1-229ENST00000512418 TLN2Q9Y4G6 2542 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 PRR14LQ5THK1 2151 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 ZANQ9Y493 2812 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 ENPP1P22413 925 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 ETV4P43268 484 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 CCR4P51679 360 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 CLDN8P56748 225 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 VSNL1P62760 191 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 RPS26P62854 115 aaKnown RBP13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 EMX2Q04743 252 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 P2RY6Q15077 328 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 SMU1Q2TAY7 513 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 PDZK1Q5T2W1 519 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 ALKBH2Q6NS38 261 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 ADAM5Q6NVV9 412 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 RFWD2Q8NHY2 731 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 HSD17B8Q92506 261 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 KISS1RQ969F8 398 aaPredicted RBP13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 ARL8AQ96BM9 186 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 ZIM3Q96PE6 472 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 SERHL2Q9H4I8 314 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 BCO1Q9HAY6 547 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 RNF115Q9Y4L5 304 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 USF3Q68DE3 2245 aa13.07□□□□□ -0.32
CCHCR1-229ENST00000512418 FREM1Q5H8C1 2179 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 HIVEP2P31629 2446 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 IGHV3-15A0A0B4J1V0 119 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 RNF103-CHMP3A0A140T963 221 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 A0A1W2PNR3 127 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 SERINC4A6NH21 518 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 ESPNB1AK53 854 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 TYROBPO43914 113 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 STX11O75558 287 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 ADAP00813 363 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 CREB1P16220 341 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 MATN1P21941 496 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 ATP5J2P56134 94 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 RPS4XP62701 263 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 SKP2Q13309 424 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 ITGADQ13349 1161 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 TSC22D1Q15714 1073 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 GPR68Q15743 365 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 TAB1Q15750 504 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 ZNF141Q15928 474 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 PGS1Q32NB8 556 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 TIGD2Q4W5G0 525 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 C6orf120Q7Z4R8 191 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 CLECL1Q8IZS7 167 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 RAB3IL1Q8TBN0 382 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 ST8SIA1Q92185 356 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 ZNF524Q96C55 264 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 SLC35G5Q96KT7 338 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 PSD2Q9BQI7 771 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 POTEKPQ9BYX7 375 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 LAT2Q9GZY6 243 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 ESRP2Q9H6T0 727 aaKnown RBP13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 ING1Q9UK53 422 aaPredicted RBP13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 LAMP3Q9UQV4 416 aa13.06□□□□□ -0.32
CCHCR1-229ENST00000512418 CSPG4Q6UVK1 2322 aa13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 ZNF814B7Z6K7 855 aa13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 RNASET2O00584 256 aaKnown RBP13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 CLOCKO15516 846 aa13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 FCMRO60667 390 aa13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 CYTIPO60759 359 aa13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 DNAJA2O60884 412 aa13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 CD3EP07766 207 aa13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 OR3A2P47893 321 aa13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 PDCD2Q16342 344 aaPredicted RBP13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 ARHGAP11BQ3KRB8 267 aa13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 NCMAPQ5T1S8 102 aa13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 OR4F3Q6IEY1 312 aa13.05□□□□□ -0.32
CCHCR1-229ENST00000512418 EMBQ6PCB8 327 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms