RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 KCNK5O95279 499 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 MAGEB1P43366 347 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 CLCNKAP51800 687 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 RPS21P63220 83 aaKnown RBP7.89□□□□□ -1.15
HTT-208ENST00000510626 LRRC26Q2I0M4 334 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 C22orf39Q6P5X5 142 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 STPG2Q8N412 459 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 GABARAPL1Q9H0R8 117 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 V9GYS6 101 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 GCAP28676 217 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 GABRA3P34903 492 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 MLC1Q15049 377 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 SLC46A3Q7Z3Q1 461 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 GPX8Q8TED1 209 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 GLYATL2Q8WU03 294 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 MOKQ9UQ07 419 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 LRRC37A3O60309 1634 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 A0A0G2JLL6 359 aaPredicted RBP7.89□□□□□ -1.15
HTT-208ENST00000510626 RPS10-NUDT3A0A1W2PQS6 291 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 RPS10P46783 165 aaKnown RBP7.89□□□□□ -1.15
HTT-208ENST00000510626 SYPL2Q5VXT5 272 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 CXCL17Q6UXB2 119 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 PRRT2Q7Z6L0 340 aaPredicted RBP7.89□□□□□ -1.15
HTT-208ENST00000510626 NAXDQ8IW45 347 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 CDRT4Q8N9R6 151 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 UTP4Q969X6 686 aaKnown RBP7.89□□□□□ -1.15
HTT-208ENST00000510626 KLRG1Q96E93 195 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 CMSS1Q9BQ75 279 aaKnown RBP7.89□□□□□ -1.15
HTT-208ENST00000510626 CLMPQ9H6B4 373 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 KLF15Q9UIH9 416 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 NPIPA2E9PIF3 369 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 NPIPA3F8WFD2 350 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 CLDN7O95471 211 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 PM20D1Q6GTS8 502 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 LYSMD2Q8IV50 215 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 NUP43Q8NFH3 380 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 OR2A12Q8NGT7 310 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 SPRYD4Q8WW59 207 aaPredicted RBP7.89□□□□□ -1.15
HTT-208ENST00000510626 DCLRE1CQ96SD1 692 aaKnown RBP7.89□□□□□ -1.15
HTT-208ENST00000510626 DOK1Q99704 481 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 ZNF442Q9H7R0 627 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 NMNAT1Q9HAN9 279 aaPredicted RBP7.89□□□□□ -1.15
HTT-208ENST00000510626 EXOSC3Q9NQT5 275 aaKnown RBP7.89□□□□□ -1.15
HTT-208ENST00000510626 CDKN1CP49918 316 aaPredicted RBP7.89□□□□□ -1.15
HTT-208ENST00000510626 ERVFC1P60507 584 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 BEX3Q00994 111 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 TAF9Q16594 264 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 YIF1BQ5BJH7 314 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 METTL7AQ9H8H3 244 aa7.89□□□□□ -1.15
HTT-208ENST00000510626 CACNA1BQ00975 2339 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 CCL22O00626 93 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 FZD7O75084 574 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 CALCBP10092 127 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 HTR1FP30939 366 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 SOX17Q9H6I2 414 aaPredicted RBP7.88□□□□□ -1.15
HTT-208ENST00000510626 RALGAPA1Q6GYQ0 2036 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 KDM3BQ7LBC6 1761 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 TMEM129A0AVI4 362 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 TSPAN12O95859 305 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 LAP3P28838 519 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 CCR9P51686 369 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 GPR17Q13304 367 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 ACSM3Q53FZ2 586 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 BRICD5Q6PL45 260 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 PLEKHJ1Q9NW61 149 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 B4DXG7 233 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 EFNA3P52797 238 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 POU4F3Q15319 338 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 FCN2Q15485 313 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 BCL7AQ4VC05 210 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 COMMD6Q7Z4G1 85 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 BBS1Q8NFJ9 593 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 CASD1Q96PB1 797 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 INTS14Q96SY0 518 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 TAS2R16Q9NYV7 291 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 COPS3Q9UNS2 423 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 TRAV18A0A075B6X5 111 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 LOC102725191A0A1B0GVB3 256 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 UBE2MP61081 183 aaKnown RBP7.88□□□□□ -1.15
HTT-208ENST00000510626 LTB4RQ15722 352 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 FCRLBQ6BAA4 426 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 ZNF485Q8NCK3 441 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 OR51T1Q8NGJ9 327 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 OR5L1Q8NGL2 311 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 SLC25A44Q96H78 314 aaPredicted RBP7.88□□□□□ -1.15
HTT-208ENST00000510626 UBQLN3Q9H347 655 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 RASD1Q9Y272 281 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 SMAD6O43541 496 aaKnown RBP7.88□□□□□ -1.15
HTT-208ENST00000510626 MAS1P04201 325 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 MPPED2Q15777 294 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 GTDC1Q4AE62 458 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 PLBD1Q6P4A8 553 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 SBSNQ6UWP8 590 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 CBLL1Q75N03 491 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 FAM110BQ8TC76 370 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 RBMXL1Q96E39 390 aaKnown RBP7.88□□□□□ -1.15
HTT-208ENST00000510626 ZNF778Q96MU6 729 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 SLC22A12Q96S37 553 aa7.88□□□□□ -1.15
HTT-208ENST00000510626 UHRF1Q96T88 793 aaPredicted RBP7.88□□□□□ -1.15
HTT-208ENST00000510626 NKX6-2Q9C056 277 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms