RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CXorf56Q9H5V9 222 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 NOP53Q9NZM5 478 aaKnown RBP13.71□□□□□ -0.21
TPM3-219ENST00000509409 IGHV3-15A0A0B4J1V0 119 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 A0A1W2PNR3 127 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 TRIM64A6NGJ6 449 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 SERINC4A6NH21 518 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 TRIM64BA6NI03 449 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 ADAP00813 363 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 RPS26P62854 115 aaKnown RBP13.7□□□□□ -0.22
TPM3-219ENST00000509409 SELENBP1Q13228 472 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 QPRTQ15274 297 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 PDCD2Q16342 344 aaPredicted RBP13.7□□□□□ -0.22
TPM3-219ENST00000509409 OR4F3Q6IEY1 312 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 CLECL1Q8IZS7 167 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 CLEC4FQ8N1N0 589 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 SLC43A2Q8N370 569 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 OR4A15Q8NGL6 344 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 AKAP1Q92667 903 aaKnown RBP eCLIP13.7□□□□□ -0.228e-7■■■■□ 24.6
TPM3-219ENST00000509409 S100PBPQ96BU1 408 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 COX4I2Q96KJ9 171 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 PKNOX2Q96KN3 472 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 SLC35G5Q96KT7 338 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 THUMPD3Q9BV44 507 aaKnown RBP13.7□□□□□ -0.22
TPM3-219ENST00000509409 GSX2Q9BZM3 304 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 SERINC1Q9NRX5 453 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 KLHL13Q9P2N7 655 aa13.7□□□□□ -0.22
TPM3-219ENST00000509409 ARID1AO14497 2285 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 C9JVG2 144 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 NPIPB9F8W1W9 429 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 HS3ST1O14792 307 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 CLOCKO15516 846 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 ITM2AO43736 263 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 TYROBPO43914 113 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 STX11O75558 287 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 CPSF4O95639 269 aaKnown RBP13.69□□□□□ -0.22
TPM3-219ENST00000509409 AK1P00568 194 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 ENPP1P22413 925 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 CASP9P55211 416 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 RAC3P60763 192 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 CHI3L2Q15782 390 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 SFRP5Q5T4F7 317 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 EMBQ6PCB8 327 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 TFAP2EQ6VUC0 442 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 C16orf62Q7Z3J2 963 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 ZNF619Q8N2I2 560 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 XAGE5Q8WWM1 108 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 HSD17B8Q92506 261 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 KISS1RQ969F8 398 aaPredicted RBP13.69□□□□□ -0.22
TPM3-219ENST00000509409 ZNF775Q96BV0 537 aaPredicted RBP13.69□□□□□ -0.22
TPM3-219ENST00000509409 OR5B2Q96R09 309 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 DPY30Q9C005 99 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 NMUR2Q9GZQ4 415 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 LAT2Q9GZY6 243 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 AKTIPQ9H8T0 292 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 GP6Q9HCN6 339 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 NGBQ9NPG2 151 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 EXD2Q9NVH0 621 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 MKLN1Q9UL63 735 aa13.69□□□□□ -0.22
TPM3-219ENST00000509409 RNF103-CHMP3A0A140T963 221 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 RGS16O15492 202 aaPredicted RBP13.68□□□□□ -0.22
TPM3-219ENST00000509409 FCMRO60667 390 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 GCM2O75603 506 aaPredicted RBP13.68□□□□□ -0.22
TPM3-219ENST00000509409 CNOT4O95628 575 aaKnown RBP13.68□□□□□ -0.22
TPM3-219ENST00000509409 CSTAP01040 98 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 ETV4P43268 484 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 ATP5J2P56134 94 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 ABCE1P61221 599 aaKnown RBP13.68□□□□□ -0.22
TPM3-219ENST00000509409 RASGEF1BQ0VAM2 473 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 SMU1Q2TAY7 513 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 ARHGAP11BQ3KRB8 267 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 KRT71Q3SY84 523 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 TIGD2Q4W5G0 525 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 SLC25A53Q5H9E4 307 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 ATAD3BQ5T9A4 648 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 EIF3MQ7L2H7 374 aaKnown RBP13.68□□□□□ -0.22
TPM3-219ENST00000509409 OLIG3Q7RTU3 272 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 GABRG1Q8N1C3 465 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 ZNF611Q8N823 705 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 ZNF781Q8N8C0 355 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 VPS37AQ8NEZ2 397 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 RAB3IL1Q8TBN0 382 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 AENQ8WTP8 325 aaKnown RBP13.68□□□□□ -0.22
TPM3-219ENST00000509409 ZNF524Q96C55 264 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 ARSGQ96EG1 525 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 QRSL1Q9H0R6 528 aaKnown RBP13.68□□□□□ -0.22
TPM3-219ENST00000509409 OR51I1Q9H343 314 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 COQ10BQ9H8M1 238 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 KLHL9Q9P2J3 617 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 LAMP3Q9UQV4 416 aa13.68□□□□□ -0.22
TPM3-219ENST00000509409 RNASET2O00584 256 aaKnown RBP13.67□□□□□ -0.22
TPM3-219ENST00000509409 SERPINE1P05121 402 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 CD3EP07766 207 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 MYZAPP0CAP1 466 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 UBTFL6P0CB48 400 aaPredicted RBP13.67□□□□□ -0.22
TPM3-219ENST00000509409 OR12D1P0DN82 309 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 NID1P14543 1247 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 PGCP20142 388 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 SESN3P58005 492 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 C21orf58P58505 322 aa13.67□□□□□ -0.22
TPM3-219ENST00000509409 ZNF844Q08AG5 666 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms