RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 ARSGQ96EG1 525 aa16.73■□□□□ 0.27
UBE3D-207ENST00000509102 ADGRG7Q96K78 797 aa16.73■□□□□ 0.27
UBE3D-207ENST00000509102 TEX37Q96LM6 180 aa16.73■□□□□ 0.27
UBE3D-207ENST00000509102 LAT2Q9GZY6 243 aa16.73■□□□□ 0.27
UBE3D-207ENST00000509102 OPN3Q9H1Y3 402 aaPredicted RBP16.73■□□□□ 0.27
UBE3D-207ENST00000509102 RMND5AQ9H871 391 aa16.73■□□□□ 0.27
UBE3D-207ENST00000509102 SERINC1Q9NRX5 453 aa16.73■□□□□ 0.27
UBE3D-207ENST00000509102 ZNF226Q9NYT6 803 aa16.73■□□□□ 0.27
UBE3D-207ENST00000509102 PCNX3Q9H6A9 2034 aa16.73■□□□□ 0.27
UBE3D-207ENST00000509102 A0A0J9YW62 118 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 FAM221AA4D161 298 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 UBDO15205 165 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 OIP5O43482 229 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 KIAA0513O60268 411 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 UGT2B17O75795 530 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 ANP32DO95626 131 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 KRT75O95678 551 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 CD1EP15812 388 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 PGCP20142 388 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 DNAJA1P31689 397 aaKnown RBP16.72■□□□□ 0.27
UBE3D-207ENST00000509102 GNA13Q14344 377 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 QPRTQ15274 297 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 CTU2Q2VPK5 515 aaKnown RBP16.72■□□□□ 0.27
UBE3D-207ENST00000509102 RNF130Q86XS8 419 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 CDC20BQ86Y33 519 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 ZNF619Q8N2I2 560 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 ATP6V1C2Q8NEY4 427 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 ST8SIA1Q92185 356 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 MAELQ96JY0 434 aaKnown RBP16.72■□□□□ 0.27
UBE3D-207ENST00000509102 ATP6V1G3Q96LB4 118 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 NPAS1Q99742 590 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 MED18Q9BUE0 208 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 THUMPD3Q9BV44 507 aaKnown RBP16.72■□□□□ 0.27
UBE3D-207ENST00000509102 ZIM2Q9NZV7 527 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 SPG11Q96JI7 2443 aa16.72■□□□□ 0.27
UBE3D-207ENST00000509102 C9JVG2 144 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 C16orf97H3BN30 126 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 SS18L1O75177 396 aaPredicted RBP16.71■□□□□ 0.27
UBE3D-207ENST00000509102 UBTFL6P0CB48 400 aaPredicted RBP16.71■□□□□ 0.27
UBE3D-207ENST00000509102 DNASE1P24855 282 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 IL12AP29459 219 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 MAGEA8P43361 318 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 SLC6A8P48029 635 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 STX1BP61266 288 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 FAM27E3Q08E93 113 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 SKP2Q13309 424 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 RNPS1Q15287 305 aaKnown RBP16.71■□□□□ 0.27
UBE3D-207ENST00000509102 TMEM176BQ3YBM2 270 aaPredicted RBP16.71■□□□□ 0.27
UBE3D-207ENST00000509102 SLC9B1Q4ZJI4 515 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 TYW3Q6IPR3 259 aaKnown RBP16.71■□□□□ 0.27
UBE3D-207ENST00000509102 C3orf33Q6P1S2 294 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 MIER2Q8N344 545 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 ZFP90Q8TF47 636 aa16.71■□□□□ 0.27
UBE3D-207ENST00000509102 TRNT1Q96Q11 434 aaKnown RBP16.71■□□□□ 0.27
UBE3D-207ENST00000509102 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.71■□□□□ 0.27
UBE3D-207ENST00000509102 SPIN1Q9Y657 262 aaPredicted RBP16.71■□□□□ 0.27
UBE3D-207ENST00000509102 HMGN4O00479 90 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 POLR3GO15318 223 aaPredicted RBP16.7■□□□□ 0.26
UBE3D-207ENST00000509102 ART1P52961 327 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 GUSBP1Q15486 140 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 TOMM34Q15785 309 aaPredicted RBP16.7■□□□□ 0.26
UBE3D-207ENST00000509102 ZNF239Q16600 458 aaKnown RBP16.7■□□□□ 0.26
UBE3D-207ENST00000509102 EXOC3L2Q2M3D2 409 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 SLC25A53Q5H9E4 307 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 TMEM201Q5SNT2 666 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 ZNF474Q6S9Z5 364 aaPredicted RBP16.7■□□□□ 0.26
UBE3D-207ENST00000509102 MSANTD1Q6ZTZ1 278 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 HDXQ7Z353 690 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 ZNF610Q8N9Z0 462 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 ZNF563Q8TA94 476 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 MARK4Q96L34 752 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 C7orf26Q96N11 449 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 INPP5KQ9BT40 448 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 SAP130Q9H0E3 1048 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 SDR39U1Q9NRG7 319 aaPredicted RBP16.7■□□□□ 0.26
UBE3D-207ENST00000509102 PLSCR4Q9NRQ2 329 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 ST6GALNAC2Q9UJ37 374 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 CLEC4AQ9UMR7 237 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 TESMINQ9Y4I5 508 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 USH1CQ9Y6N9 552 aa16.7■□□□□ 0.26
UBE3D-207ENST00000509102 TMEM247A6NEH6 219 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 TGDSO95455 350 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 H6PDO95479 791 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 CGAP01215 116 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 GSNP06396 782 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 NR2F1P10589 423 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 IL11P20809 199 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 UGT2B10P36537 528 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 TIGD2Q4W5G0 525 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 FRRS1Q6ZNA5 592 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 BEND4Q6ZU67 534 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 SLC43A2Q8N370 569 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 ARFGAP2Q8N6H7 521 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 SLC25A43Q8WUT9 341 aaPredicted RBP16.69■□□□□ 0.26
UBE3D-207ENST00000509102 NRGNQ92686 78 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 PMM1Q92871 262 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 ITCHQ96J02 903 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 KLHDC3Q9BQ90 382 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 TACO1Q9BSH4 297 aaKnown RBP16.69■□□□□ 0.26
UBE3D-207ENST00000509102 KLHL4Q9C0H6 718 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms