RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 HNRNPCL1O60812 293 aaKnown RBP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 ATP5HO75947 161 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 DNAJB5O75953 348 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 KRT34O76011 436 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 PRSS23O95084 383 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 HMGN2P05204 90 aaKnown RBP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 CT45A8P0DMV1 189 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 CT45A9P0DMV2 189 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 GPX2P18283 190 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 MATN1P21941 496 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 CALB2P22676 271 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 PTPN6P29350 595 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 SOAT1P35610 550 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 KRT20P35900 424 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 PIGAP37287 484 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 CYB561P49447 251 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 KHKP50053 298 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 HLCSP50747 726 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 RASSF2P50749 326 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 NR0B1P51843 470 aaKnown RBP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 PRKAG1P54619 331 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 RAP2BP61225 183 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 PSG6Q00889 435 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 SF3A3Q12874 501 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 ZNF155Q12901 538 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 SNTA1Q13424 505 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 ART3Q13508 389 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 LASP1Q14847 261 aaKnown RBP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 EXOSC7Q15024 291 aaKnown RBP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 NTRK2Q16620 822 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 DECR1Q16698 335 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 TRMT5Q32P41 509 aaKnown RBP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 RUNDC3AQ59EK9 446 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 CT45A2Q5DJT8 189 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 RABL3Q5HYI8 236 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 PAGE3Q5JUK9 113 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 ATAD3BQ5T9A4 648 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 PRAMEF8Q5VWM4 474 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 PRAMEF7Q5VXH5 474 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 REP15Q6BDI9 236 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 MFSD12Q6NUT3 480 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 RPUSD3Q6P087 351 aaKnown RBP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 SLC2A7Q6PXP3 512 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 DLEU7Q6UYE1 221 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 TRPM8Q7Z2W7 1104 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 NUP54Q7Z3B4 507 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 SNX32Q86XE0 403 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 SLC30A8Q8IWU4 369 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 KIF2BQ8N4N8 673 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 ZADH2Q8N4Q0 377 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 TMEM156Q8N614 296 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 ZNF321PQ8N8H1 164 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 FDCSPQ8NFU4 85 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 OR8J3Q8NGG0 315 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 FAM110BQ8TC76 370 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 TMEM125Q96AQ2 219 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 LRRC58Q96CX6 371 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 SPACA9Q96E40 222 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 NSL1Q96IY1 281 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 MAGED4Q96JG8 741 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 ANKRD27Q96NW4 1050 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 GAL3ST4Q96RP7 486 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 RASL10BQ96S79 203 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 CGREF1Q99674 301 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 MESP1Q9BRJ9 268 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 UTP23Q9BRU9 249 aaKnown RBP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 ITPAQ9BY32 194 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 HOXD1Q9GZZ0 328 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 NXF5Q9H1B4 397 aaKnown RBP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 C1orf21Q9H246 121 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 TPT1P8Q9HAU6 139 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 GPR35Q9HC97 309 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 HPF1Q9NWY4 346 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 CNIH4Q9P003 139 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 ARMCX1Q9P291 453 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 OR10H1Q9Y4A9 318 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 EXPH5Q8NEV8 1989 aa5.03□□□□□ -1.6
HMGB1P44-201ENST00000508597 ATRXP46100 2492 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 TNRC6AQ8NDV7 1962 aaKnown RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 TRAV17A0A0B4J275 112 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 ASPDHA6ND91 283 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 OR5H15A6NDH6 313 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 TMEM200CA6NKL6 621 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 A6NL46 340 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 C9JVG2 144 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 WWP2O00308 870 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 FBP2O00757 339 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 AKAP8O43823 692 aaKnown RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 HS6ST1O60243 411 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 PRKNO60260 465 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 TSPAN2O60636 221 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 OR2J2O76002 312 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 NADKO95544 446 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 NGFRP08138 427 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 CELA2AP08217 269 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 HOXB9P17482 250 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 EFNA1P20827 205 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 ATP6V1C1P21283 382 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 ABCD3P28288 659 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms