RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 CBFBQ13951 182 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 RNPS1Q15287 305 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 CHI3L2Q15782 390 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 PGS1Q32NB8 556 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 KRT71Q3SY84 523 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 TMEM176BQ3YBM2 270 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 SLC25A53Q5H9E4 307 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 GTF2IRD2BQ6EKJ0 949 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 BHLHB9Q6PI77 547 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 PRSS57Q6UWY2 283 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 ZNF704Q6ZNC4 412 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 Q71RC1 249 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 FCRLAQ7L513 359 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 OLIG3Q7RTU3 272 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 NUFIP2Q7Z417 695 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 C6orf120Q7Z4R8 191 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 GTF2IRD2Q86UP8 949 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 STK32CQ86UX6 486 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 TUSC5Q8IXB3 177 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 CIARTQ8N365 385 aaPredicted RBP11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 TMCO5AQ8N6Q1 288 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 OR8J2Q8NGG1 315 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 PERPQ96FX8 193 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 PLPPR2Q96GM1 343 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 PPP1R36Q96LQ0 422 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 SDF2Q99470 211 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 TMEM204Q9BSN7 226 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 GSX2Q9BZM3 304 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 C20orf27Q9GZN8 174 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 ZNF350Q9GZX5 532 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 AKTIPQ9H8T0 292 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 GP6Q9HCN6 339 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 FANCFQ9NPI8 374 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 TIGARQ9NQ88 270 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 GPR52Q9Y2T5 361 aa11.58□□□□□ -0.56
HMGCS1-205ENST00000508319 WDR91A4D1P6 747 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 SERINC4A6NH21 518 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 GTPBP1O00178 669 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 EIF4E2O60573 245 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 FCMRO60667 390 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 DNAJA2O60884 412 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 SCN2BO60939 215 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 UGT2B17O75795 530 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 AK1P00568 194 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 PLAUP00749 431 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 DHRS4L1P0CG22 281 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 MATN1P21941 496 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 ENPP1P22413 925 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 CCR4P51679 360 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 ABCE1P61221 599 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 QPRTQ15274 297 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 GPR68Q15743 365 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 ZNF141Q15928 474 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 TMEM201Q5SNT2 666 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 YTHDF3Q7Z739 585 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 WFDC8Q8IUA0 241 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 ATP6V1C2Q8NEY4 427 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 TOR1AIP2Q8NFQ8 470 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 RFWD2Q8NHY2 731 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 MIPOL1Q8TD10 442 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 S100PBPQ96BU1 408 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 REXO5Q96IC2 774 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 SLC35G5Q96KT7 338 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 Q96MF0 132 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 SORT1Q99523 831 aa11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 SSU72Q9NP77 194 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 ING1Q9UK53 422 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 V9GYY5 206 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-205ENST00000508319 HIVEP2P31629 2446 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 IGHV3-15A0A0B4J1V0 119 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 A0A1W2PNR3 127 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 DUXAA6NLW8 204 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 H7C1Q1 480 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 ANKRD28O15084 1053 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 BIRC5O15392 142 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 KIAA0513O60268 411 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 H6PDO95479 791 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 HEXAP06865 529 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 MYZAPP0CAP1 466 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 SLC7A1P30825 629 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 PTH2RP49190 550 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 CASP9P55211 416 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 PHC1P78364 1004 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 FUT5Q11128 374 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 TSC22D1Q15714 1073 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 ARHGAP11BQ3KRB8 267 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 TIGD2Q4W5G0 525 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 HEPHL1Q6MZM0 1159 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 C3orf33Q6P1S2 294 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 SEZ6L2Q6UXD5 910 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 CLEC9AQ6UXN8 241 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 PLEKHM3Q6ZWE6 761 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 ANKRD46Q86W74 232 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 SLC43A2Q8N370 569 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 FAM71CQ8NEG0 241 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 STEAP2Q8NFT2 490 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 OR4A15Q8NGL6 344 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 PSD2Q9BQI7 771 aa11.56□□□□□ -0.56
HMGCS1-205ENST00000508319 LAT2Q9GZY6 243 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms