RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 IER3P46695 156 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 VEGFCP49767 419 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 EMDP50402 254 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 GDF10P55107 478 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CARD18P57730 90 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CORO7P57737 925 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 GNG11P61952 73 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CDK16Q00536 496 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CKAP4Q07065 602 aaKnown RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 LCP2Q13094 533 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SP140Q13342 867 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CSHL1Q14406 222 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 MAD2L1BPQ15013 274 aaPredicted RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 EXOSC7Q15024 291 aaKnown RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 OASLQ15646 514 aaKnown RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 PARP6Q2NL67 630 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 PRICKLE4Q2TBC4 344 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 PLPPR5Q32ZL2 321 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 GRAMD1BQ3KR37 738 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 ZBTB37Q5TC79 503 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 C6orf163Q5TEZ5 329 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 DUPD1Q68J44 220 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SLC35E4Q6ICL7 350 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 OR7E24Q6IFN5 339 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 MRM1Q6IN84 353 aaKnown RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 NEPROQ6NW34 567 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 AADACL2Q6P093 401 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 ANKRD16Q6P6B7 361 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 GALNT18Q6P9A2 607 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 DRICH1Q6PGQ1 229 aaPredicted RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 APOOLQ6UXV4 268 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 TMIGD1Q6UXZ0 262 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 NPSR1Q6W5P4 371 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 USP51Q70EK9 711 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CENPUQ71F23 418 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SATL1Q86VE3 508 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 RETREG3Q86VR2 466 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 NDUFA11Q86Y39 141 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 LDLRAD3Q86YD5 345 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 TREML1Q86YW5 311 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 WDR75Q8IWA0 830 aaKnown RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CPNE9Q8IYJ1 553 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 C1orf174Q8IYL3 243 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SLC35F6Q8N357 371 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 C17orf78Q8N4C9 275 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 TBC1D19Q8N5T2 526 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 KLHDC1Q8N7A1 406 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CEP112Q8N8E3 955 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 C7orf57Q8NEG2 295 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 C1orf162Q8NEQ5 155 aaPredicted RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SDR9C7Q8NEX9 313 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 OR7G1Q8NGA0 311 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 OR4F17Q8NGA8 305 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 OR52E4Q8NGH9 312 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SLC35B2Q8TB61 432 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 C1orf54Q8WWF1 131 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SSMEM1Q8WWF3 244 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 PEX13Q92968 403 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 ZDHHC16Q969W1 377 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CPNE4Q96A23 557 aaPredicted RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF524Q96C55 264 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 FBXL8Q96CD0 374 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 TMCO6Q96DC7 493 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 DNAJA3Q96EY1 480 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 VPS39Q96JC1 886 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 PBKQ96KB5 322 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 FAM71F1Q96KD3 344 aaPredicted RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SIGLEC10Q96LC7 697 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 KLHL15Q96M94 604 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 RNF145Q96MT1 663 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 OR4F4Q96R69 305 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 PELOQ9BRX2 385 aaKnown RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 TMEM79Q9BSE2 394 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 FAM167BQ9BTA0 163 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 LRRC1Q9BTT6 524 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 MRPL37Q9BZE1 423 aaKnown RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 IL22Q9GZX6 179 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 EHD1Q9H4M9 534 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 PARVBQ9HBI1 364 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 TMEM165Q9HC07 324 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 XAB2Q9HCS7 855 aaKnown RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SAYSD1Q9NPB0 183 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SLC7A10Q9NS82 523 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 OXSMQ9NWU1 459 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 BFARQ9NZS9 450 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SLC17A7Q9P2U7 560 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 REV1Q9UBZ9 1251 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 TRMT6Q9UJA5 497 aaKnown RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF490Q9ULM2 529 aaPredicted RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 SNX12Q9UMY4 172 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 VDAC3Q9Y277 283 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 CRYL1Q9Y2S2 319 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 GPR55Q9Y2T6 319 aaPredicted RBP2.79□□□□□ -1.96
TCOF1-208ENST00000506063 AMDHD2Q9Y303 409 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 PLLPQ9Y342 182 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 DHRS7Q9Y394 339 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 TCAF1Q9Y4C2 921 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 DNAH17Q9UFH2 4485 aa2.79□□□□□ -1.96
TCOF1-208ENST00000506063 GLOD5A6NK44 160 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 SDR42E2A6NKP2 422 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms