RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 REM1O75628 298 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PAK4O96013 591 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PRG2P13727 222 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SHC1P29353 583 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CTNNB1P35222 781 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ATP6V1E1P36543 226 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 KHKP50053 298 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ABATP80404 500 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TSPAN31Q12999 210 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 KIR3DS1Q14943 382 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 RNASE12Q5GAN4 147 aaKnown RBP6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 EOGTQ5NDL2 527 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CCNJQ5T5M9 372 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 IDNKQ5T6J7 187 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ZNF57Q68EA5 555 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 LAMTOR1Q6IAA8 161 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CD200R1LQ6Q8B3 271 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SMARCD3Q6STE5 483 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ERN2Q76MJ5 926 aaKnown RBP6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TDHQ8IZJ6 230 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 GHDCQ8N2G8 530 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TMEM99Q8N816 258 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 MRPL43Q8N983 215 aaKnown RBP6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SLC16A11Q8NCK7 471 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 NUP43Q8NFH3 380 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 OR51G2Q8NGK0 314 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 BBS10Q8TAM1 723 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SPPL3Q8TCT6 385 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 HCAR2Q8TDS4 363 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 OR8D1Q8WZ84 308 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SNAPC3Q92966 411 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 MS4A6EQ96DS6 147 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SLC35A4Q96G79 324 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ZNF514Q96K75 400 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TIMP4Q99727 224 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TMEM43Q9BTV4 400 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TTTY10Q9BZA0 68 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TMEM245Q9H330 911 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ZMAT4Q9H898 229 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TRIM45Q9H8W5 580 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SLC6A20Q9NP91 592 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TRPV5Q9NQA5 729 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TMEM74BQ9NUR3 256 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 OBP2AQ9NY56 170 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SERGEFQ9UGK8 458 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 APOBEC3BQ9UH17 382 aaKnown RBP6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CLEC4AQ9UMR7 237 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ZFR2Q9UPR6 939 aaKnown RBP6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SNRNP200O75643 2136 aaKnown RBP6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ATG2BQ96BY7 2078 aa6.1□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TRPM6Q9BX84 2022 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 NPIPA5A0A0B4J1W7 369 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CENPBD1B2RD01 187 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 NPIPA7E9PJI5 369 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 AKAP8O43823 692 aaKnown RBP6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PCDH8O95206 1070 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ZGLP1P0C6A0 271 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 GKN3PP0CG01 181 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 NPIPA8P0DM63 369 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 FSTP19883 344 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 HIST1H1TP22492 207 aaPredicted RBP6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CPN2P22792 545 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ATP5A1P25705 553 aaKnown RBP6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 NTSP30990 170 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 FGF9P31371 208 aaPredicted RBP6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 IL12RB1P42701 662 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SRP9P49458 86 aaKnown RBP6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PPP3R1P63098 170 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PRDX1Q06830 199 aaKnown RBP6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TGM3Q08188 693 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SLC9A5Q14940 896 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TRAM2Q15035 370 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 NDUFA9Q16795 377 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 BTBD16Q32M84 506 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PLBD1Q6P4A8 553 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 FAM111BQ6SJ93 734 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 RASSF6Q6ZTQ3 369 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 RRM2BQ7LG56 351 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 GDF7Q7Z4P5 450 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 MRGPREQ86SM8 312 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TMEFF1Q8IYR6 380 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 POGLUT1Q8NBL1 392 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 DEDD2Q8WXF8 326 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PPP1R16AQ96I34 528 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CAMK1GQ96NX5 476 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 QRFPRQ96P65 431 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SLC38A2Q96QD8 506 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PINK1Q9BXM7 581 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 BCL2L10Q9HD36 194 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 RBFOX1Q9NWB1 397 aaKnown RBP6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TAS2R7Q9NYW3 318 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 MOSPD1Q9UJG1 213 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CES1P1Q9UKY3 287 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 EXOSC1Q9Y3B2 195 aaKnown RBP6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SPEGQ15772 3267 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 A0A0B4J203 849 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 A0A0G2JPF8 293 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 A0A1W2PPK0 400 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 HNRNPCL2B2RXH8 293 aa6.09□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 HNRNPCL3B7ZW38 293 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms