RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 PSMD3O43242 534 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 HCRTO43612 131 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 VENTXO95231 258 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 OLFM2O95897 454 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 CT45A8P0DMV1 189 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 CT45A9P0DMV2 189 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 RALAP11233 206 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 B4GALT1P15291 398 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 GTF2H1P32780 548 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 ATP5C1P36542 298 aaKnown RBP4.42□□□□□ -1.7
NIPBL-203ENST00000503274 OPRD1P41143 372 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 MATKP42679 507 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 MTIF2P46199 727 aaKnown RBP4.42□□□□□ -1.7
NIPBL-203ENST00000503274 NDST1P52848 882 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 ATXN3P54252 364 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-203ENST00000503274 SF3A2Q15428 464 aaKnown RBP4.42□□□□□ -1.7
NIPBL-203ENST00000503274 STX1AQ16623 288 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 CT45A2Q5DJT8 189 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 DCAF12Q5T6F0 453 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 RNLSQ5VYX0 342 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 REP15Q6BDI9 236 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 RFWD3Q6PCD5 774 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 TMEM270Q6UE05 265 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 SCARA5Q6ZMJ2 495 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 PRSS42Q7Z5A4 293 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 RABEPKQ7Z6M1 372 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 ACOT1Q86TX2 421 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 ARHGAP18Q8N392 663 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 NAT8LQ8N9F0 302 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 ICA1LQ8NDH6 482 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 OR1K1Q8NGR3 316 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 ZPLD1Q8TCW7 415 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 SLC2A14Q8TDB8 520 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 C16orf58Q96GQ5 468 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 PAGE5Q96GU1 130 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 CNOT6LQ96LI5 555 aaKnown RBP4.42□□□□□ -1.7
NIPBL-203ENST00000503274 DDX50Q9BQ39 737 aaKnown RBP4.42□□□□□ -1.7
NIPBL-203ENST00000503274 OSBPL8Q9BZF1 889 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 DPEP3Q9H4B8 488 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 FAM124BQ9H5Z6 455 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-203ENST00000503274 SMYD3Q9H7B4 428 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 GDF3Q9NR23 364 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 DMAC2Q9NW81 257 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 RMND1Q9NWS8 449 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 TECRQ9NZ01 308 aaKnown RBP4.42□□□□□ -1.7
NIPBL-203ENST00000503274 IL37Q9NZH6 218 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 HOOK1Q9UJC3 728 aaKnown RBP4.42□□□□□ -1.7
NIPBL-203ENST00000503274 ANGPTL2Q9UKU9 493 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 KIF26AQ9ULI4 1882 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-203ENST00000503274 TRAF3IP3Q9Y228 551 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 ANAPC1Q9H1A4 1944 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 FAM208BQ5VWN6 2430 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 PI4KAP42356 2102 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 USP24Q9UPU5 2620 aa4.42□□□□□ -1.7
NIPBL-203ENST00000503274 COL4A2P08572 1712 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 KMT2BQ9UMN6 2715 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-203ENST00000503274 GREB1Q4ZG55 1949 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 IGLV3-10A0A075B6K4 115 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 A0A1B0GVL5 298 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 FAM92AA1XBS5 289 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 FOXI3A8MTJ6 420 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-203ENST00000503274 CETN3O15182 167 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 COCHO43405 550 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 KLRC4O43908 158 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 FMO6PO60774 539 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 SMC2O95347 1197 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 KLF8O95600 359 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-203ENST00000503274 ASS1P00966 412 aaKnown RBP4.41□□□□□ -1.7
NIPBL-203ENST00000503274 HLA-DRAP01903 254 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 ZDHHC11BP0C7U3 371 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 EPB41P11171 864 aaKnown RBP4.41□□□□□ -1.7
NIPBL-203ENST00000503274 CASP1P29466 404 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 STIP1P31948 543 aaKnown RBP4.41□□□□□ -1.7
NIPBL-203ENST00000503274 ALDH3B1P43353 468 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 RPL34P49207 117 aaKnown RBP4.41□□□□□ -1.7
NIPBL-203ENST00000503274 DHPSP49366 369 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-203ENST00000503274 CASP4P49662 377 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 NME5P56597 212 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 MAP3K7CLP57077 242 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 YWHAEP62258 255 aaKnown RBP4.41□□□□□ -1.7
NIPBL-203ENST00000503274 HSPA14Q0VDF9 509 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 AARDQ4LEZ3 155 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 IFI44LQ53G44 452 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 C10orf120Q5SQS8 335 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 Q6ZRG5 221 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 ADCK1Q86TW2 530 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 CCDC170Q8IYT3 715 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 HDDC3Q8N4P3 179 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 ALLCQ8N6M5 410 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 SIDT2Q8NBJ9 832 aaKnown RBP4.41□□□□□ -1.7
NIPBL-203ENST00000503274 RHOXF1Q8NHV9 184 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 PTP4A1Q93096 173 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 KCNK16Q96T55 309 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 TSG101Q99816 390 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 EDEM2Q9BV94 578 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 BBS2Q9BXC9 721 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 SLC5A7Q9GZV3 580 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 CSNK1G1Q9HCP0 422 aa4.41□□□□□ -1.7
NIPBL-203ENST00000503274 TMEM9BQ9NQ34 198 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms