RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 PLAG1Q6DJT9 500 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 PAQR6Q6TCH4 344 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 C6orf120Q7Z4R8 191 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 MEX3DQ86XN8 651 aaKnown RBP8.29□□□□□ -1.08
FN1-227ENST00000498719 MMAAQ8IVH4 418 aaKnown RBP8.29□□□□□ -1.08
FN1-227ENST00000498719 FAM20CQ8IXL6 584 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 GPR65Q8IYL9 337 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 IQCF1Q8N6M8 205 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 TFGQ92734 400 aaPredicted RBP8.29□□□□□ -1.08
FN1-227ENST00000498719 MTERF3Q96E29 417 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 MISP3Q96FF7 219 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 QRFPRQ96P65 431 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 MACROD1Q9BQ69 325 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 EGLN1Q9GZT9 426 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 NXF2Q9GZY0 626 aaKnown RBP8.29□□□□□ -1.08
FN1-227ENST00000498719 CTPS2Q9NRF8 586 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 PLEKHA6Q9Y2H5 1048 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 DSPPQ9NZW4 1301 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 A0A1B0GTQ1 180 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 HTR3EA5X5Y0 456 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 TLR4O00206 839 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 HMGN4O00479 90 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 PRNPP04156 253 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 SERPIND1P05546 499 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 ITGB7P26010 798 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 DDX6P26196 483 aaKnown RBP eCLIP8.29□□□□□ -1.088e-30■■■□□ 15.2
FN1-227ENST00000498719 POU3F4P49335 361 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 NKX2-5P52952 324 aaPredicted RBP8.29□□□□□ -1.08
FN1-227ENST00000498719 PRMT2P55345 433 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 SPDYE7PQ495Y7 208 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 SAXO2Q658L1 398 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 C17orf64Q86WR6 236 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 ZNF557Q8N988 423 aaPredicted RBP8.29□□□□□ -1.08
FN1-227ENST00000498719 C17orf47Q8NEP4 570 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 KBTBD8Q8NFY9 601 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 SLC7A13Q8TCU3 470 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 RAD51AP1Q96B01 352 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 NEURL3Q96EH8 262 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 TRMT61AQ96FX7 289 aaKnown RBP8.29□□□□□ -1.08
FN1-227ENST00000498719 C16orf58Q96GQ5 468 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 ABHD8Q96I13 439 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 KLHL15Q96M94 604 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 OPALINQ96PE5 141 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 MAPKAP1Q9BPZ7 522 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 CDCA4Q9BXL8 241 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 DPEP2Q9H4A9 486 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 KCNK12Q9HB15 430 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 EXOSC4Q9NPD3 245 aaKnown RBP8.29□□□□□ -1.08
FN1-227ENST00000498719 CLN6Q9NWW5 311 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 ERVK13-1Q9NX77 482 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 POU2F3Q9UKI9 436 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 ICKQ9UPZ9 632 aa8.29□□□□□ -1.08
FN1-227ENST00000498719 MBD3L4A6NDZ8 208 aaPredicted RBP8.28□□□□□ -1.08
FN1-227ENST00000498719 BTBD17A6NE02 478 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 MBD3L3A6NE82 208 aaPredicted RBP8.28□□□□□ -1.08
FN1-227ENST00000498719 EFCAB10A6NFE3 127 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 LANCL1O43813 399 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 LCMT2O60294 686 aaKnown RBP8.28□□□□□ -1.08
FN1-227ENST00000498719 CBR3O75828 277 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 TIMP1P01033 207 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 CHRM5P08912 532 aaPredicted RBP8.28□□□□□ -1.08
FN1-227ENST00000498719 OR12D1P0DN82 309 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 PRKAR1AP10644 381 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 TNNI3P19429 210 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 CSTF2P33240 577 aaKnown RBP eCLIP8.28□□□□□ -1.08
FN1-227ENST00000498719 UCP3P55916 312 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 ZNF181Q2M3W8 571 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 CDC73Q6P1J9 531 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 PNCKQ6P2M8 343 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 LCTLQ6UWM7 567 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 ZNF367Q7RTV3 350 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 IQCHQ86VS3 1027 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 SLC34A3Q8N130 599 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 TCEANCQ8N8B7 351 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 FAM46DQ8NEK8 389 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 SPSB4Q96A44 273 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 TRIB1Q96RU8 372 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 SDHCQ99643 169 aaPredicted RBP8.28□□□□□ -1.08
FN1-227ENST00000498719 MS4A8Q9BY19 250 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 UCK2Q9BZX2 261 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 ANKHQ9HCJ1 492 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 HHATLQ9HCP6 504 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 KCNK6Q9Y257 313 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 KLK4Q9Y5K2 254 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 COL4A3Q01955 1670 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 MEX3AA1L020 520 aaKnown RBP8.28□□□□□ -1.08
FN1-227ENST00000498719 WIPF3A6NGB9 483 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 HEPACAM2A8MVW5 462 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 CCRL2O00421 344 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 KMOO15229 486 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 SIGLEC6O43699 453 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 CYP7B1O75881 506 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 CLUP10909 449 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 AREGP15514 252 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 FRKP42685 505 aaPredicted RBP8.28□□□□□ -1.08
FN1-227ENST00000498719 SNU13P55769 128 aaKnown RBP8.28□□□□□ -1.08
FN1-227ENST00000498719 KCNJ8Q15842 424 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 HNRNPA1L2Q32P51 320 aaKnown RBP8.28□□□□□ -1.08
FN1-227ENST00000498719 DCST1Q5T197 706 aa8.28□□□□□ -1.08
FN1-227ENST00000498719 C18orf63Q68DL7 685 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms