RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 FAM198BQ6UWH4 519 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 TMEM207Q6UWW9 146 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 LPCAT2Q7L5N7 544 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 ZFAND4Q86XD8 727 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 LINC00346Q8IVM7 164 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 RIMKLAQ8IXN7 391 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 EID3Q8N140 333 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 CBR4Q8N4T8 237 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 MAPKAPK5-AS1Q8N8E1 139 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 OR13F1Q8NGS4 319 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 OR10T2Q8NGX3 314 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 ANKRD49Q8WVL7 239 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 TRUB1Q8WWH5 349 aaKnown RBP4.21□□□□□ -1.74
SSR3-209ENST00000498205 HPSE2Q8WWQ2 592 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 NDRG1Q92597 394 aaKnown RBP4.21□□□□□ -1.74
SSR3-209ENST00000498205 ISOC1Q96CN7 298 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 VMP1Q96GC9 406 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 ATXN7L3BQ96GX2 97 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 CDKN2AIPNLQ96HQ2 116 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 CELF6Q96J87 481 aaKnown RBP4.21□□□□□ -1.74
SSR3-209ENST00000498205 ART5Q96L15 291 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 PPP3R2Q96LZ3 170 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 NPAS2Q99743 824 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 SLC29A1Q99808 456 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 APOL2Q9BQE5 337 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 C1orf50Q9BV19 199 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 NTMT1Q9BV86 223 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 UGT2B28Q9BY64 529 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 SHCBP1LQ9BZQ2 653 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 GABARAPL1Q9H0R8 117 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 OPA3Q9H6K4 179 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 ALG9Q9H6U8 611 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 NOL11Q9H8H0 719 aaKnown RBP4.21□□□□□ -1.74
SSR3-209ENST00000498205 HPS4Q9NQG7 708 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 SERINC1Q9NRX5 453 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 FAIMQ9NVQ4 179 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 SMOXQ9NWM0 555 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 CHCHD3Q9NX63 227 aaKnown RBP4.21□□□□□ -1.74
SSR3-209ENST00000498205 CMTM6Q9NX76 183 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 PKD2L2Q9NZM6 624 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 CCDC167Q9P0B6 97 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 CRNNQ9UBG3 495 aaPredicted RBP4.21□□□□□ -1.74
SSR3-209ENST00000498205 UXTQ9UBK9 157 aaPredicted RBP4.21□□□□□ -1.74
SSR3-209ENST00000498205 DNAJB9Q9UBS3 223 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 SLC2A6Q9UGQ3 507 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 PCTPQ9UKL6 214 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 GINS2Q9Y248 185 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 TMED5Q9Y3A6 229 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 FADS3Q9Y5Q0 445 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 MYO16Q9Y6X6 1858 aa4.21□□□□□ -1.74
SSR3-209ENST00000498205 GOLGB1Q14789 3259 aaKnown RBP4.21□□□□□ -1.74
SSR3-209ENST00000498205 ZNF106Q9H2Y7 1883 aaKnown RBP4.2□□□□□ -1.74
SSR3-209ENST00000498205 SYNJ2BP-COX16A0A087WUM0 186 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 TRBV5-4A0A0C4DH59 114 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 A0A0J9YVX5 310 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 RNF103-CHMP3A0A140T963 221 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 NEMP2A6NFY4 417 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 TMEM221A6NGB7 291 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 ANKRD61A6NGH8 418 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 E9PQ18 207 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 GOLGA8TH3BQL2 631 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 H3BSA7 217 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 UPK1AO00322 258 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 E2F3O00716 465 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 CLOCKO15516 846 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 KDELR3O43731 214 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 RECQL5O94762 991 aaPredicted RBP4.2□□□□□ -1.74
SSR3-209ENST00000498205 OTCP00480 354 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 GOT2P00505 430 aaKnown RBP4.2□□□□□ -1.74
SSR3-209ENST00000498205 CHRNA1P02708 482 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 RAF1P04049 648 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 IL6P05231 212 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 CYBAP13498 195 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 GGT1P19440 569 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 ITIH1P19827 911 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 HMGCLP35914 325 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 CD86P42081 329 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 MAGEA8P43361 318 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 LUMP51884 338 aaPredicted RBP4.2□□□□□ -1.74
SSR3-209ENST00000498205 POLR2JP52435 117 aaKnown RBP4.2□□□□□ -1.74
SSR3-209ENST00000498205 TPD52P55327 224 aaPredicted RBP4.2□□□□□ -1.74
SSR3-209ENST00000498205 LIPEQ05469 1076 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 SLC10A7Q0GE19 358 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 LRRC74AQ0VAA2 488 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 PEX6Q13608 980 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 ZNF235Q14590 738 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 ODF4Q2M2E3 257 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 GPR33Q49SQ1 333 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 ATP6AP1LQ52LC2 224 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 C6orf136Q5SQH8 315 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 MLIPQ5VWP3 458 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 IYDQ6PHW0 289 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 DLEU7Q6UYE1 221 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 GPRIN3Q6ZVF9 776 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 SLC24A5Q71RS6 500 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 SNX20Q7Z614 316 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 MAML2Q8IZL2 1156 aaPredicted RBP4.2□□□□□ -1.74
SSR3-209ENST00000498205 SNX31Q8N9S9 440 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 SMYD1Q8NB12 490 aa4.2□□□□□ -1.74
SSR3-209ENST00000498205 NPEPL1Q8NDH3 523 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms