RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 OR3A2P47893 321 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 FUT6P51993 359 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 DCDC1P59894 354 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 KRTAP10-2P60368 255 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 NFATC2Q13469 925 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 KLF5Q13887 457 aaPredicted RBP2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 RBM39Q14498 530 aaKnown RBP2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 P2RY6Q15077 328 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 PPP1R7Q15435 360 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 SYPL1Q16563 259 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 CLPPQ16740 277 aaPredicted RBP2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 TMEM44Q2T9K0 475 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 KRTAP24-1Q3LI83 254 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 NKAIN1Q4KMZ8 207 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 TMEM119Q4V9L6 283 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 CYBRD1Q53TN4 286 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 SFT2D3Q587I9 215 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 SPANXN4Q5MJ08 99 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 CELF3Q5SZQ8 465 aaKnown RBP2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 MARCH8Q5T0T0 291 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 LIN9Q5TKA1 542 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 TMEM225Q6GV28 225 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 RTL6Q6ICC9 239 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 SLC25A47Q6Q0C1 308 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 C17orf107Q6ZR85 190 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 PIGZQ86VD9 579 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 FAM228AQ86W67 206 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 ECHDC2Q86YB7 292 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 WDR49Q8IV35 697 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 PSTKQ8IV42 348 aaKnown RBP2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 GPR65Q8IYL9 337 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 DND1Q8IYX4 353 aaKnown RBP2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 SLC22A15Q8IZD6 547 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 KIRREL3Q8IZU9 778 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 EID3Q8N140 333 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 PARP8Q8N3A8 854 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 MLKLQ8NB16 471 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 ADAD2Q8NCV1 583 aaKnown RBP2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 DDHD1Q8NEL9 900 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 OR7A2PQ8NGA2 310 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 OR5D13Q8NGL4 314 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 OR13C5Q8NGS8 318 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 PRSS3P2Q8NHM4 247 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 AKR7LQ8NHP1 331 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 APOBEC4Q8WW27 367 aaKnown RBP2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 TCP11Q8WWU5 503 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 DYRK2Q92630 601 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 DLX4Q92988 240 aaPredicted RBP2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZG16BQ96DA0 208 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 RTP4Q96DX8 246 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 TCEAL4Q96EI5 215 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 TGM7Q96PF1 710 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 ERGIC2Q96RQ1 377 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 CPXM1Q96SM3 734 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 RHOXF2Q9BQY4 288 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 UBAC1Q9BSL1 405 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 PINK1Q9BXM7 581 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 MAGT1Q9H0U3 335 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 AUNIPQ9H7T9 357 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 SGK2Q9HBY8 427 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 FAM114A2Q9NRY5 505 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 HIF1ANQ9NWT6 349 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 PEF1Q9UBV8 284 aaKnown RBP2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 CYTH4Q9UIA0 394 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZNF639Q9UID6 485 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 TP53TG5Q9Y2B4 290 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 OR1A2Q9Y585 309 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 FOCADQ5VW36 1801 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 CHD3Q12873 2000 aaKnown RBP2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 NEDD4P46934 1319 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 TTC41PQ6P2S7 1318 aa2.11□□□□□ -2.07
CKS1BP2-201ENST00000497342 A0A075B6Q4 140 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 IGHV4OR15-8A0A075B7B6 117 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 NPIPA5A0A0B4J1W7 369 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 IGHV1OR15-9A0A0B4J2B8 117 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 SERTM2A0A1B0GWG4 89 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 SH3PXD2BA1X283 911 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 FRG2CA6NGY1 282 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 FAM47DPA6NHR8 397 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 PCP4L1A6NKN8 68 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 WASHC1A8K0Z3 465 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 EFCAB7A8K855 629 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 HHLA1C9JL84 531 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 NPIPA7E9PJI5 369 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 NPIPA5E9PKD4 350 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 H0YC42 278 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 K7EM74 188 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 M0QZ92 97 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 IMPA2O14732 288 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 TAPBPO15533 448 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 PRKAB2O43741 272 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZG16O60844 167 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 B3GAT3O94766 335 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 TNFSF15O95150 251 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 VENTXO95231 258 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 IVLP07476 585 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 NPIPA8P0DM63 369 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 ANXA8P13928 327 aa2.1□□□□□ -2.07
CKS1BP2-201ENST00000497342 PGCP20142 388 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms