RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ARL8AQ96BM9 186 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 MAELQ96JY0 434 aaKnown RBP14.08□□□□□ -0.16
HDAC4-213ENST00000496347 TEX37Q96LM6 180 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 ALPK1Q96QP1 1244 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 PANX1Q96RD7 426 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 LAT2Q9GZY6 243 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 CXXC4Q9H2H0 198 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 MANSC1Q9H8J5 431 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 FANCFQ9NPI8 374 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 ZNF226Q9NYT6 803 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 SLC35A3Q9Y2D2 325 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 WDR45Q9Y484 360 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 GPR45Q9Y5Y3 372 aa14.08□□□□□ -0.16
HDAC4-213ENST00000496347 C16orf97H3BN30 126 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 CASKO14936 926 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 UGT2B17O75795 530 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 CPSF4O95639 269 aaKnown RBP14.07□□□□□ -0.16
HDAC4-213ENST00000496347 CSTAP01040 98 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 NID1P14543 1247 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 IL11P20809 199 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 DNASE1P24855 282 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 MAGEA8P43361 318 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 KCNJ5P48544 419 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 RNF144AP50876 292 aaPredicted RBP14.07□□□□□ -0.16
HDAC4-213ENST00000496347 UFM1P61960 85 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 FAM27E3Q08E93 113 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 FUT5Q11128 374 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 QPRTQ15274 297 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 RNPS1Q15287 305 aaKnown RBP14.07□□□□□ -0.16
HDAC4-213ENST00000496347 PDCD4Q53EL6 469 aaKnown RBP14.07□□□□□ -0.16
HDAC4-213ENST00000496347 GTF2IRD2BQ6EKJ0 949 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 TYW3Q6IPR3 259 aaKnown RBP14.07□□□□□ -0.16
HDAC4-213ENST00000496347 GTF2IRD2Q86UP8 949 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 FBXO27Q8NI29 283 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 PIWIL2Q8TC59 973 aaKnown RBP14.07□□□□□ -0.16
HDAC4-213ENST00000496347 ROPN1LQ96C74 230 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 MBD6Q96DN6 1003 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 REXO5Q96IC2 774 aaKnown RBP14.07□□□□□ -0.16
HDAC4-213ENST00000496347 OR52E6Q96RD3 313 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 MED18Q9BUE0 208 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 SAP130Q9H0E3 1048 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 WDR55Q9H6Y2 383 aaPredicted RBP14.07□□□□□ -0.16
HDAC4-213ENST00000496347 GP6Q9HCN6 339 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 MKLN1Q9UL63 735 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 ACANP16112 2415 aa14.07□□□□□ -0.16
HDAC4-213ENST00000496347 ROS1P08922 2347 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 GOLGA8QA0A0J9YX86 632 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 CENPVL1A0A0U1RR11 272 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 GOLGA8OA6NCC3 632 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 CCDC154A6NI56 674 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 GOLGA8NF8WBI6 632 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 ZNF195O14628 629 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 FCMRO60667 390 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 RAF1P04049 648 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 IL6P05231 212 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 OR12D1P0DN82 309 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 KITP10721 976 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 SHC1P29353 583 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 AGTR1P30556 359 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 SLC7A1P30825 629 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 NME5P56597 212 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 CARD18P57730 90 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 TOMM34Q15785 309 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-213ENST00000496347 GSTA3Q16772 222 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 AGBL2Q5U5Z8 902 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 FRRS1Q6ZNA5 592 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 MSANTD1Q6ZTZ1 278 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 STK32CQ86UX6 486 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 ZNF619Q8N2I2 560 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 SLC25A43Q8WUT9 341 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-213ENST00000496347 TMEM234Q8WY98 164 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 OSTF1Q92882 214 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 TACO1Q9BSH4 297 aaKnown RBP14.06□□□□□ -0.16
HDAC4-213ENST00000496347 COQ10BQ9H8M1 238 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 PLEKHF2Q9H8W4 249 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 EXOSC3Q9NQT5 275 aaKnown RBP14.06□□□□□ -0.16
HDAC4-213ENST00000496347 SDR39U1Q9NRG7 319 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-213ENST00000496347 PLSCR4Q9NRQ2 329 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 KLHL13Q9P2N7 655 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 KCNE5Q9UJ90 142 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 LIPT1Q9Y234 373 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 PLEKHA6Q9Y2H5 1048 aa14.06□□□□□ -0.16
HDAC4-213ENST00000496347 C9JVG2 144 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 HMGN4O00479 90 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 OPN1LWP04000 364 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 UBTFL6P0CB48 400 aaPredicted RBP14.05□□□□□ -0.16
HDAC4-213ENST00000496347 PPP3CBP16298 524 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 CRYGSP22914 178 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 IL12AP29459 219 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 PGM1P36871 562 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 CASP9P55211 416 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 NXNQ6DKJ4 435 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 MAVSQ7Z434 540 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 RNF130Q86XS8 419 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 CMIPQ8IY22 773 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 RFWD2Q8NHY2 731 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 ABHD3Q8WU67 409 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 XAGE5Q8WWM1 108 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 RAB8BQ92930 207 aa14.05□□□□□ -0.16
HDAC4-213ENST00000496347 TRNT1Q96Q11 434 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms