RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 RFLNBQ8N5W9 214 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 OR4M1Q8NGD0 313 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 OR14A2Q96R54 314 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 SEMA4CQ9C0C4 833 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 PPIL3Q9H2H8 161 aaKnown RBP12.5□□□□□ -0.41
GPC1-209ENST00000495100 TRIM36Q9NQ86 728 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 POM121CA8CG34 1229 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 ORC5O43913 435 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 FMO6PO60774 539 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 STX11O75558 287 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 UGT2B10P36537 528 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 OR1D4P47884 311 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 RFX2P48378 723 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 MAZP56270 477 aaKnown RBP12.5□□□□□ -0.41
GPC1-209ENST00000495100 PCBP4P57723 403 aaKnown RBP12.5□□□□□ -0.41
GPC1-209ENST00000495100 LYPD8Q6UX82 237 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 VASH1Q7L8A9 365 aaPredicted RBP12.5□□□□□ -0.41
GPC1-209ENST00000495100 LRRC56Q8IYG6 542 aaPredicted RBP12.5□□□□□ -0.41
GPC1-209ENST00000495100 CLDN22Q8N7P3 220 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 NAXEQ8NCW5 288 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 C17orf47Q8NEP4 570 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 GHSRQ92847 366 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 RASD2Q96D21 266 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 LMF1Q96S06 567 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 POLDIP3Q9BY77 421 aaKnown RBP12.5□□□□□ -0.41
GPC1-209ENST00000495100 MIXL1Q9H2W2 232 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 ZMAT3Q9HA38 289 aaKnown RBP12.5□□□□□ -0.41
GPC1-209ENST00000495100 PELI2Q9HAT8 420 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 MAN2C1Q9NTJ4 1040 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 TAS2R7Q9NYW3 318 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 CCDC59Q9P031 241 aaKnown RBP12.5□□□□□ -0.41
GPC1-209ENST00000495100 FRYLO94915 3013 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 A0A1W2PRQ8 180 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 SHISA3A0PJX4 238 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 B4DXG7 233 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 NPIPB8E9PQR5 432 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 POLR1CO15160 346 aaPredicted RBP12.49□□□□□ -0.41
GPC1-209ENST00000495100 HCRTR1O43613 425 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 CDC40O60508 579 aaKnown RBP eCLIP12.49□□□□□ -0.41
GPC1-209ENST00000495100 SCO1O75880 301 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 CSTAP01040 98 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 EGFP01133 1207 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 ACSM3Q53FZ2 586 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 TMEM196Q5HYL7 178 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 MEDAGQ5VYS4 303 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 SLC25A25Q6KCM7 469 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 COMMD2Q86X83 199 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 C1orf216Q8TAB5 229 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 DEDD2Q8WXF8 326 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 SRRQ9GZT4 340 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 ACTR10Q9NZ32 417 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 ADAM30Q9UKF2 790 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 ERVK-19Q9WJR5 959 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 SIRT4Q9Y6E7 314 aaPredicted RBP12.49□□□□□ -0.41
GPC1-209ENST00000495100 CDHR4A6H8M9 788 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 MSL3P1P0C860 447 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 NTSR1P30989 418 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 UQCRC1P31930 480 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 ZNF81P51508 661 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 UBE2MP61081 183 aaKnown RBP12.49□□□□□ -0.41
GPC1-209ENST00000495100 TSPAN31Q12999 210 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 TMEM52Q8NDY8 209 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 TTLQ8NG68 377 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 SDHCQ99643 169 aaPredicted RBP12.49□□□□□ -0.41
GPC1-209ENST00000495100 DPCDQ9BVM2 203 aaPredicted RBP12.49□□□□□ -0.41
GPC1-209ENST00000495100 ANKHQ9HCJ1 492 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 ANAPC1Q9H1A4 1944 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 YES1P07947 543 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 HNRNPA1P09651 372 aaKnown RBP eCLIP12.49□□□□□ -0.41
GPC1-209ENST00000495100 UGT2B7P16662 529 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 POU6F2P78424 691 aaPredicted RBP12.49□□□□□ -0.41
GPC1-209ENST00000495100 PLK5Q496M5 336 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 MFSD12Q6NUT3 480 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 CHMP1BQ7LBR1 199 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 NOXA1Q86UR1 476 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 VWA5B2Q8N398 1253 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 BOLLQ8N9W6 283 aaKnown RBP12.49□□□□□ -0.41
GPC1-209ENST00000495100 GOT1L1Q8NHS2 421 aaPredicted RBP12.49□□□□□ -0.41
GPC1-209ENST00000495100 SMPDL3BQ92485 455 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 THAP7Q9BT49 309 aaPredicted RBP12.49□□□□□ -0.41
GPC1-209ENST00000495100 B3GAT2Q9NPZ5 323 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 FLVCR2Q9UPI3 526 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 ASB4Q9Y574 426 aa12.49□□□□□ -0.41
GPC1-209ENST00000495100 URADA6NGE7 173 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 LANCL1O43813 399 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 OR6A2O95222 327 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 HRGP04196 525 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 HMGN1P05114 100 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 UCHL1P09936 223 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 CT62P0C5K7 136 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 ZNF3P17036 446 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 ZNF10P21506 573 aaPredicted RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 C5AR1P21730 350 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 S100A1P23297 94 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 NKAIN2Q5VXU1 208 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 ZNF770Q6IQ21 691 aaPredicted RBP12.48□□□□□ -0.41
GPC1-209ENST00000495100 SLC35D2Q76EJ3 337 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 ETFBKMTQ8IXQ9 262 aa12.48□□□□□ -0.41
GPC1-209ENST00000495100 GPR135Q8IZ08 494 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms