RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ZNF441Q8N8Z8 693 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 GATSQ8NAP1 163 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 ANKK1Q8NFD2 765 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 BBS1Q8NFJ9 593 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 OR4C3Q8NH37 302 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 RNF217Q8TC41 542 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 C3orf49Q96BT1 292 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 BPIFA2Q96DR5 249 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 RNFT2Q96EX2 444 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 LCORQ96JN0 433 aaPredicted RBP9.79□□□□□ -0.84
CLCN6-208ENST00000494028 GAL3ST4Q96RP7 486 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 PHOX2BQ99453 314 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 MGLLQ99685 303 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 DPYSL5Q9BPU6 564 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 MND1Q9BWT6 205 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 WWTR1Q9GZV5 400 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 RACGAP1Q9H0H5 632 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 OR51E2Q9H255 320 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 LRRN3Q9H3W5 708 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 FN3KQ9H479 309 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 GAREM1Q9H706 876 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 ZBTB20Q9HC78 741 aaPredicted RBP9.79□□□□□ -0.84
CLCN6-208ENST00000494028 IL20RAQ9UHF4 553 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 CFL2Q9Y281 166 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 SDK1Q7Z5N4 2213 aa9.79□□□□□ -0.84
CLCN6-208ENST00000494028 IGKV1D-42A0A075B6H8 117 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 SYNDIG1LA6NDD5 238 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 METTL15A6NJ78 407 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 PATE3B3GLJ2 98 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 SOCS6O14544 535 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 ARHGAP33O14559 1287 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 TO15178 435 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 DYRK3O43781 588 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 HCN1O60741 890 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 HSMCR30P0CW71 290 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 UBL4AP11441 157 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 IDUAP35475 653 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 UGT2B10P36537 528 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 OPRL1P41146 370 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 ETV5P41161 510 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 CLK1P49759 484 aaKnown RBP9.78□□□□□ -0.84
CLCN6-208ENST00000494028 ETV1P50549 477 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 GPR143P51810 404 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 FOXL2P58012 376 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 RAB40BQ12829 278 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 MLLT11Q13015 90 aaPredicted RBP9.78□□□□□ -0.84
CLCN6-208ENST00000494028 FHL1Q13642 323 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 NCF4Q15080 339 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 NXNL2Q5VZ03 156 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 ZNF385CQ66K41 422 aaPredicted RBP9.78□□□□□ -0.84
CLCN6-208ENST00000494028 LINC00114Q6XXX2 140 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 SHFQ7M4L6 423 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 BMP8AQ7Z5Y6 402 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 SLCO6A1Q86UG4 719 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 C1orf210Q8IVY1 113 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 SLITRK4Q8IW52 837 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 PRR22Q8IZ63 422 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 CADM2Q8N3J6 435 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 LNX2Q8N448 690 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 EID2Q8N6I1 236 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 NANOGP1Q8N7R0 232 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 C7orf57Q8NEG2 295 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 KBTBD8Q8NFY9 601 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 IFI44Q8TCB0 444 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 KISS1RQ969F8 398 aaPredicted RBP9.78□□□□□ -0.84
CLCN6-208ENST00000494028 CLIP3Q96DZ5 547 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 PLEKHA8Q96JA3 519 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 ZC3H10Q96K80 434 aaKnown RBP9.78□□□□□ -0.84
CLCN6-208ENST00000494028 COL25A1Q9BXS0 654 aaPredicted RBP9.78□□□□□ -0.84
CLCN6-208ENST00000494028 TGIF2Q9GZN2 237 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 SLIRPQ9GZT3 109 aaKnown RBP9.78□□□□□ -0.84
CLCN6-208ENST00000494028 DCSTAMPQ9H295 470 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 PLGRKTQ9HBL7 147 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 MCCC2Q9HCC0 563 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 AKIP1Q9NQ31 210 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 EXOSC3Q9NQT5 275 aaKnown RBP9.78□□□□□ -0.84
CLCN6-208ENST00000494028 CCDC59Q9P031 241 aaKnown RBP9.78□□□□□ -0.84
CLCN6-208ENST00000494028 OSGIN1Q9UJX0 560 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 ICAM5Q9UMF0 924 aa9.78□□□□□ -0.84
CLCN6-208ENST00000494028 EXOSC1Q9Y3B2 195 aaKnown RBP9.78□□□□□ -0.84
CLCN6-208ENST00000494028 TRAV27A0A087WT01 109 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 A0A1B0GVG6 124 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 TMEM129A0AVI4 362 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 CCDC182A6NF36 153 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 OR6C76A6NM76 312 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 CCRL2O00421 344 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 TSPAN2O60636 221 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 ICOSLGO75144 302 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 NADKO95544 446 aaPredicted RBP9.77□□□□□ -0.85
CLCN6-208ENST00000494028 PPP1R3DO95685 299 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 CER1O95813 267 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 IGHA1P01876 353 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 HMGN1P05114 100 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 SCG5P05408 212 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 SAGP10523 405 aaPredicted RBP9.77□□□□□ -0.85
CLCN6-208ENST00000494028 MST1P26927 711 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 HTR1FP30939 366 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 LCN1P31025 176 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 CD79BP40259 229 aa9.77□□□□□ -0.85
CLCN6-208ENST00000494028 ADH7P40394 386 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms