RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 EFNA2O43921 213 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 SS18L1O75177 396 aaPredicted RBP24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 SLC22A3O75751 556 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 CSTAP01040 98 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 IL6P05231 212 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 POU2F1P14859 743 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 KCNJ5P48544 419 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 ANXA11P50995 505 aaKnown RBP24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 CCR4P51679 360 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 GSTA3Q16772 222 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 SLC9B1Q4ZJI4 515 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 EIF3MQ7L2H7 374 aaKnown RBP24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 ZNF610Q8N9Z0 462 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 OR6K3Q8NGY3 331 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 PLSCR4Q9NRQ2 329 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 ST6GALNAC2Q9UJ37 374 aa24.28■■□□□ 1.48
SH3GL3-204ENST00000492099 C9JVG2 144 aa24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 ETV2O00321 342 aaPredicted RBP24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 DNAJA2O60884 412 aa24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 CYP7B1O75881 506 aa24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 NTN1O95631 604 aa24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 PABPC4LP0CB38 370 aaKnown RBP24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 HPCAP84074 193 aa24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 SELENBP1Q13228 472 aa24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 SKP2Q13309 424 aa24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 QPRTQ15274 297 aa24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 TYW3Q6IPR3 259 aaKnown RBP24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 ZNF621Q6ZSS3 439 aa24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 OLIG3Q7RTU3 272 aa24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 CPNE4Q96A23 557 aaPredicted RBP24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 REXO5Q96IC2 774 aaKnown RBP24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 SLC35A3Q9Y2D2 325 aa24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 TESMINQ9Y4I5 508 aa24.27■■□□□ 1.48
SH3GL3-204ENST00000492099 CD1EP15812 388 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 SHC1P29353 583 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 UGT2B10P36537 528 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 IST1P53990 364 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 FUT5Q11128 374 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 TMEM176BQ3YBM2 270 aaPredicted RBP24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 GPAT3Q53EU6 434 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 MAVSQ7Z434 540 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 RNF130Q86XS8 419 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 ZNF619Q8N2I2 560 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 INPP5KQ9BT40 448 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 THUMPD3Q9BV44 507 aaKnown RBP24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 ZIM2Q9NZV7 527 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 CLEC4AQ9UMR7 237 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 LIPT1Q9Y234 373 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 AKAP9Q99996 3911 aa24.26■■□□□ 1.47
SH3GL3-204ENST00000492099 CENPVL1A0A0U1RR11 272 aa24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 C16orf97H3BN30 126 aa24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 HMGN4O00479 90 aa24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 UBDO15205 165 aa24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 UBTFL6P0CB48 400 aaPredicted RBP24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 PGCP20142 388 aa24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 CDKN2CP42773 168 aa24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 ART1P52961 327 aa24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 MAPK14Q16539 360 aa24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 ZNF239Q16600 458 aaKnown RBP24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 FRRS1Q6ZNA5 592 aa24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 TMEM234Q8WY98 164 aa24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 ST8SIA1Q92185 356 aa24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 LIME1Q9H400 295 aa24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 SDR39U1Q9NRG7 319 aaPredicted RBP24.25■■□□□ 1.47
SH3GL3-204ENST00000492099 RFXANKO14593 260 aa24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 HRGP04196 525 aa24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 PGM1P36871 562 aa24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 ATP6V1C2Q8NEY4 427 aa24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 ZFP90Q8TF47 636 aa24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 ZNF524Q96C55 264 aa24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 ATP6V1G3Q96LB4 118 aa24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 C7orf26Q96N11 449 aa24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 WFIKKN1Q96NZ8 548 aa24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 TRNT1Q96Q11 434 aaKnown RBP24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 FANCFQ9NPI8 374 aa24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 ZNF226Q9NYT6 803 aa24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 USH1CQ9Y6N9 552 aa24.24■■□□□ 1.47
SH3GL3-204ENST00000492099 DIAPH2O60879 1101 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 H6PDO95479 791 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 KRT75O95678 551 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 GSNP06396 782 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 NID1P14543 1247 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 DNASE1P24855 282 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 SLC7A1P30825 629 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 MAGEA8P43361 318 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 RNPS1Q15287 305 aaKnown RBP24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 TIGD2Q4W5G0 525 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 C3orf33Q6P1S2 294 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 FAM71CQ8NEG0 241 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 RNF128Q8TEB7 428 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 ROBO4Q8WZ75 1007 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 MARK4Q96L34 752 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 OR52B2Q96RD2 323 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 MED18Q9BUE0 208 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 SRXN1Q9BYN0 137 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 SERINC1Q9NRX5 453 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 CCM2LQ9NUG4 571 aaPredicted RBP24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 AKAP6Q13023 2319 aa24.23■■□□□ 1.47
SH3GL3-204ENST00000492099 ABCA4P78363 2273 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms