RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ZNF75CPQ92670 426 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 ARSGQ96EG1 525 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 PANX1Q96RD7 426 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 LAT2Q9GZY6 243 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 OR10A4Q9H209 315 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 OR51I1Q9H343 314 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 PNPOQ9NVS9 261 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 AIG1Q9NVV5 245 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 KLHL9Q9P2J3 617 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 MARCOQ9UEW3 520 aaPredicted RBP14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 ICAM5Q9UMF0 924 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 LIPT1Q9Y234 373 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 GPR52Q9Y2T5 361 aa14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 ANKHD1Q8IWZ3 2542 aaKnown RBP14.84□□□□□ -0.03
PDLIM2-217ENST00000491330 NPIPA5A0A0B4J1W7 369 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 A0A0J9YW62 118 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 NPIPA7E9PJI5 369 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 SDHDO14521 159 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 KRT75O95678 551 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 CGAP01215 116 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 NPIPA8P0DM63 369 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 CRYGSP22914 178 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 SLC6A8P48029 635 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 CSNK2A1P68400 391 aaPredicted RBP14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 QPRTQ15274 297 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 ZNF141Q15928 474 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 FAM174BQ3ZCQ3 159 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 BEX5Q5H9J7 111 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 ANKRD46Q86W74 232 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 LRRC8CQ8TDW0 803 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 ZFP90Q8TF47 636 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 SLC25A43Q8WUT9 341 aaPredicted RBP14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 STON2Q8WXE9 905 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 PMM1Q92871 262 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 ZC3HAV1LQ96H79 300 aaKnown RBP14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 SLC35A5Q9BS91 424 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 LIME1Q9H400 295 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 BTNL2Q9UIR0 455 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 MKLN1Q9UL63 735 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 CLEC4AQ9UMR7 237 aa14.83□□□□□ -0.04
PDLIM2-217ENST00000491330 ANP32DO95626 131 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 IL6P05231 212 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 FESP07332 822 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 OR12D1P0DN82 309 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 FOSL1P15407 271 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 PRKCAP17252 672 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 KLK2P20151 261 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 PSMA4P25789 261 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 RAC3P60763 192 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 RPS26P62854 115 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 ZNF239Q16600 458 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 SHEQ5VZ18 495 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 CBLN3Q6UW01 205 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 C20orf204Q6ZNR8 217 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 ZNF621Q6ZSS3 439 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 MSANTD1Q6ZTZ1 278 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 FCRLAQ7L513 359 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 SSX8Q7RTT4 187 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 ROPN1LQ96C74 230 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 NEURL3Q96EH8 262 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 ADGRG7Q96K78 797 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 OR52E6Q96RD3 313 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 THUMPD3Q9BV44 507 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 ARMC7Q9H6L4 198 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 RMND5AQ9H871 391 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 PLEKHF2Q9H8W4 249 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 TMEM45AQ9NWC5 275 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 KCNE3Q9Y6H6 103 aa14.82□□□□□ -0.04
PDLIM2-217ENST00000491330 ANKRD17O75179 2603 aaKnown RBP14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 SMPD2O60906 423 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 ATE1O95260 518 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 YES1P07947 543 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 UBTFL6P0CB48 400 aaPredicted RBP14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 TFPIP10646 304 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 ENPP1P22413 925 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 IL32P24001 234 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 APOBEC1P41238 236 aaKnown RBP14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 HTR3AP46098 478 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 MRPL19P49406 292 aaKnown RBP14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 MERTKQ12866 999 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 CTU2Q2VPK5 515 aaKnown RBP14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 TIGD2Q4W5G0 525 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 PDCD4Q53EL6 469 aaKnown RBP14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 SPANXN4Q5MJ08 99 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 AP1ARQ63HQ0 302 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 TNFAIP8L2Q6P589 184 aaPredicted RBP14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 CMIPQ8IY22 773 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 ZNF619Q8N2I2 560 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 ARFGAP2Q8N6H7 521 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 POC1BQ8TC44 478 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 RNF128Q8TEB7 428 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 DYDC1Q8WWB3 177 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 ROBO4Q8WZ75 1007 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 CCDC115Q96NT0 180 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 OR5B2Q96R09 309 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 ZNF350Q9GZX5 532 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 C12orf49Q9H741 205 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 ZIM2Q9NZV7 527 aa14.81□□□□□ -0.04
PDLIM2-217ENST00000491330 EMC3Q9P0I2 261 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms