RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 MRGPRX4Q96LA9 322 aa28.07■■■□□ 2.08
LDB1-204ENST00000490751 KLHL28Q9NXS3 571 aa28.07■■■□□ 2.08
LDB1-204ENST00000490751 WDR45Q9Y484 360 aa28.07■■■□□ 2.08
LDB1-204ENST00000490751 GJE1A6NN92 205 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 KIAA0513O60268 411 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 CYP7B1O75881 506 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 NTN1O95631 604 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 DNASE1P24855 282 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 UGT2B10P36537 528 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 SKP2Q13309 424 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 CBFBQ13951 182 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 NXNQ6DKJ4 435 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 TYW3Q6IPR3 259 aaKnown RBP28.06■■■□□ 2.08
LDB1-204ENST00000490751 PAMR1Q6UXH9 720 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 ROPN1LQ96C74 230 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 WFIKKN1Q96NZ8 548 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 PANX1Q96RD7 426 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 ZBTB18Q99592 522 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 FOXC2Q99958 501 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 LAT2Q9GZY6 243 aa28.06■■■□□ 2.08
LDB1-204ENST00000490751 CSTAP01040 98 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 C1QCP02747 245 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 PGRP06401 933 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 MAPK14Q16539 360 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 ZNF239Q16600 458 aaKnown RBP28.05■■■□□ 2.08
LDB1-204ENST00000490751 TMEM176BQ3YBM2 270 aaPredicted RBP28.05■■■□□ 2.08
LDB1-204ENST00000490751 SLC25A53Q5H9E4 307 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 ATP6V1C2Q8NEY4 427 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 ROBO4Q8WZ75 1007 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 OR52E6Q96RD3 313 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 INPP5KQ9BT40 448 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 MED18Q9BUE0 208 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 THUMPD3Q9BV44 507 aaKnown RBP28.05■■■□□ 2.08
LDB1-204ENST00000490751 SRXN1Q9BYN0 137 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 PLEKHF2Q9H8W4 249 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 TIGARQ9NQ88 270 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 POLE3Q9NRF9 147 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 PLSCR4Q9NRQ2 329 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 GLRX2Q9NS18 164 aa28.05■■■□□ 2.08
LDB1-204ENST00000490751 CCDC154A6NI56 674 aa28.04■■■□□ 2.08
LDB1-204ENST00000490751 C16orf97H3BN30 126 aa28.04■■■□□ 2.08
LDB1-204ENST00000490751 GUSBP08236 651 aa28.04■■■□□ 2.08
LDB1-204ENST00000490751 SELENBP1Q13228 472 aa28.04■■■□□ 2.08
LDB1-204ENST00000490751 EXOC3L2Q2M3D2 409 aa28.04■■■□□ 2.08
LDB1-204ENST00000490751 SLC9B1Q4ZJI4 515 aa28.04■■■□□ 2.08
LDB1-204ENST00000490751 TRIML2Q8N7C3 387 aa28.04■■■□□ 2.08
LDB1-204ENST00000490751 CPNE4Q96A23 557 aaPredicted RBP28.04■■■□□ 2.08
LDB1-204ENST00000490751 MAELQ96JY0 434 aaKnown RBP28.04■■■□□ 2.08
LDB1-204ENST00000490751 MED13LQ71F56 2210 aa28.04■■■□□ 2.08
LDB1-204ENST00000490751 UBTFL6P0CB48 400 aaPredicted RBP28.03■■■□□ 2.08
LDB1-204ENST00000490751 CDKN2CP42773 168 aa28.03■■■□□ 2.08
LDB1-204ENST00000490751 GPAT3Q53EU6 434 aa28.03■■■□□ 2.08
LDB1-204ENST00000490751 FRRS1Q6ZNA5 592 aa28.03■■■□□ 2.08
LDB1-204ENST00000490751 EIF3MQ7L2H7 374 aaKnown RBP28.03■■■□□ 2.08
LDB1-204ENST00000490751 ZNF550Q7Z398 422 aa28.03■■■□□ 2.08
LDB1-204ENST00000490751 MAVSQ7Z434 540 aa28.03■■■□□ 2.08
LDB1-204ENST00000490751 RNF130Q86XS8 419 aa28.03■■■□□ 2.08
LDB1-204ENST00000490751 ZNF619Q8N2I2 560 aa28.03■■■□□ 2.08
LDB1-204ENST00000490751 GLB1L3Q8NCI6 653 aaPredicted RBP28.03■■■□□ 2.08
LDB1-204ENST00000490751 ZFP90Q8TF47 636 aa28.03■■■□□ 2.08
LDB1-204ENST00000490751 REXO5Q96IC2 774 aaKnown RBP28.03■■■□□ 2.08
LDB1-204ENST00000490751 MARK4Q96L34 752 aa28.03■■■□□ 2.08
LDB1-204ENST00000490751 SAP130Q9H0E3 1048 aa28.03■■■□□ 2.08
LDB1-204ENST00000490751 CXXC4Q9H2H0 198 aa28.03■■■□□ 2.08
LDB1-204ENST00000490751 COQ10BQ9H8M1 238 aa28.03■■■□□ 2.08
LDB1-204ENST00000490751 A0A1W2PPR1 153 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 PRAMEF27A3QJZ7 478 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 ETV2O00321 342 aaPredicted RBP28.02■■■□□ 2.08
LDB1-204ENST00000490751 HMGN4O00479 90 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 PABPC4LP0CB38 370 aaKnown RBP28.02■■■□□ 2.08
LDB1-204ENST00000490751 NID1P14543 1247 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 IDO1P14902 403 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 HPCAP84074 193 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 LRRC74AQ0VAA2 488 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 PDCD4Q53EL6 469 aaKnown RBP28.02■■■□□ 2.08
LDB1-204ENST00000490751 AGBL2Q5U5Z8 902 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 GTF2IRD2BQ6EKJ0 949 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 GTF2IRD2Q86UP8 949 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 PIWIL2Q8TC59 973 aaKnown RBP28.02■■■□□ 2.08
LDB1-204ENST00000490751 RNF128Q8TEB7 428 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 OIT3Q8WWZ8 545 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 KLHL4Q9C0H6 718 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 ZNF226Q9NYT6 803 aa28.02■■■□□ 2.08
LDB1-204ENST00000490751 C6orf203Q9P0P8 240 aaPredicted RBP28.02■■■□□ 2.08
LDB1-204ENST00000490751 KLF11O14901 512 aa28.01■■■□□ 2.07
LDB1-204ENST00000490751 DNAJA2O60884 412 aa28.01■■■□□ 2.07
LDB1-204ENST00000490751 RAF1P04049 648 aa28.01■■■□□ 2.07
LDB1-204ENST00000490751 GSNP06396 782 aa28.01■■■□□ 2.07
LDB1-204ENST00000490751 AGTR1P30556 359 aa28.01■■■□□ 2.07
LDB1-204ENST00000490751 TIGD2Q4W5G0 525 aa28.01■■■□□ 2.07
LDB1-204ENST00000490751 ZNF621Q6ZSS3 439 aa28.01■■■□□ 2.07
LDB1-204ENST00000490751 ABHD3Q8WU67 409 aa28.01■■■□□ 2.07
LDB1-204ENST00000490751 ST8SIA1Q92185 356 aa28.01■■■□□ 2.07
LDB1-204ENST00000490751 ZNF75CPQ92670 426 aaPredicted RBP28.01■■■□□ 2.07
LDB1-204ENST00000490751 ARL8AQ96BM9 186 aa28.01■■■□□ 2.07
LDB1-204ENST00000490751 SLC35A3Q9Y2D2 325 aa28.01■■■□□ 2.07
LDB1-204ENST00000490751 SLC7A1P30825 629 aa28■■■□□ 2.07
LDB1-204ENST00000490751 PGM1P36871 562 aa28■■■□□ 2.07
LDB1-204ENST00000490751 CHRNEQ04844 493 aa28■■■□□ 2.07
LDB1-204ENST00000490751 AP1ARQ63HQ0 302 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms