RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 DIAPH2O60879 1101 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 UGT2B17O75795 530 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 KRT75O95678 551 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 UBTFL6P0CB48 400 aaPredicted RBP15.64■□□□□ 0.09
SEC13-218ENST00000490283 CD1EP15812 388 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 PGCP20142 388 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 DNASE1P24855 282 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 SLC6A8P48029 635 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 QPRTQ15274 297 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 STK32CQ86UX6 486 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 RNF130Q86XS8 419 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 ZNF619Q8N2I2 560 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 LRRC8CQ8TDW0 803 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 ST8SIA1Q92185 356 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 NRGNQ92686 78 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 MAELQ96JY0 434 aaKnown RBP15.64■□□□□ 0.09
SEC13-218ENST00000490283 KLHDC3Q9BQ90 382 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 MED18Q9BUE0 208 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 RMND5AQ9H871 391 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 SERINC1Q9NRX5 453 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 ARGLU1Q9NWB6 273 aaPredicted RBP15.64■□□□□ 0.09
SEC13-218ENST00000490283 ZNF226Q9NYT6 803 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 ZIM2Q9NZV7 527 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 CLEC4AQ9UMR7 237 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 LIPT1Q9Y234 373 aa15.64■□□□□ 0.09
SEC13-218ENST00000490283 C16orf97H3BN30 126 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 SS18L1O75177 396 aaPredicted RBP15.63■□□□□ 0.09
SEC13-218ENST00000490283 ANP32DO95626 131 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 IL11P20809 199 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 IL12AP29459 219 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 ART1P52961 327 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 STX1BP61266 288 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 FAM27E3Q08E93 113 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 SKP2Q13309 424 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 GNA13Q14344 377 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 RNPS1Q15287 305 aaKnown RBP15.63■□□□□ 0.09
SEC13-218ENST00000490283 TOMM34Q15785 309 aaPredicted RBP15.63■□□□□ 0.09
SEC13-218ENST00000490283 ZNF239Q16600 458 aaKnown RBP15.63■□□□□ 0.09
SEC13-218ENST00000490283 EXOC3L2Q2M3D2 409 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 TMEM176BQ3YBM2 270 aaPredicted RBP15.63■□□□□ 0.09
SEC13-218ENST00000490283 SLC9B1Q4ZJI4 515 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 C3orf33Q6P1S2 294 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 ZNF474Q6S9Z5 364 aaPredicted RBP15.63■□□□□ 0.09
SEC13-218ENST00000490283 ZNF610Q8N9Z0 462 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 ZFP90Q8TF47 636 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 DYDC1Q8WWB3 177 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 MARK4Q96L34 752 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 ATP6V1G3Q96LB4 118 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 THUMPD3Q9BV44 507 aaKnown RBP15.63■□□□□ 0.09
SEC13-218ENST00000490283 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.63■□□□□ 0.09
SEC13-218ENST00000490283 ST6GALNAC2Q9UJ37 374 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 PDZD2O15018 2839 aa15.63■□□□□ 0.09
SEC13-218ENST00000490283 ANKRD17O75179 2603 aaKnown RBP15.63■□□□□ 0.09
SEC13-218ENST00000490283 CGAP01215 116 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 UGT2B10P36537 528 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 GUSBP1Q15486 140 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 SLC25A53Q5H9E4 307 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 TMEM201Q5SNT2 666 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 TYW3Q6IPR3 259 aaKnown RBP15.62■□□□□ 0.09
SEC13-218ENST00000490283 OLIG3Q7RTU3 272 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 MIER2Q8N344 545 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 ZNF563Q8TA94 476 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 C7orf26Q96N11 449 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 TRNT1Q96Q11 434 aaKnown RBP15.62■□□□□ 0.09
SEC13-218ENST00000490283 INPP5KQ9BT40 448 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 SAP130Q9H0E3 1048 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 TESMINQ9Y4I5 508 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 SPIN1Q9Y657 262 aaPredicted RBP15.62■□□□□ 0.09
SEC13-218ENST00000490283 USH1CQ9Y6N9 552 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 MED12LQ86YW9 2145 aa15.62■□□□□ 0.09
SEC13-218ENST00000490283 NUP214P35658 2090 aaPredicted RBP15.61■□□□□ 0.09
SEC13-218ENST00000490283 HMGN4O00479 90 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 POLR3GO15318 223 aaPredicted RBP15.61■□□□□ 0.09
SEC13-218ENST00000490283 H6PDO95479 791 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 GSNP06396 782 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 NR2F1P10589 423 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 SHC1P29353 583 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 CDKN2CP42773 168 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 MAGEA8P43361 318 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 IST1P53990 364 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 MERTKQ12866 999 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 TIGD2Q4W5G0 525 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 DNAJC14Q6Y2X3 702 aaPredicted RBP15.61■□□□□ 0.09
SEC13-218ENST00000490283 SPNS3Q6ZMD2 512 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 FRRS1Q6ZNA5 592 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 MSANTD1Q6ZTZ1 278 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 BEND4Q6ZU67 534 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 HDXQ7Z353 690 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 ARFGAP2Q8N6H7 521 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 RNF128Q8TEB7 428 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 ROBO4Q8WZ75 1007 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 ITCHQ96J02 903 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 TACO1Q9BSH4 297 aaKnown RBP15.61■□□□□ 0.09
SEC13-218ENST00000490283 KLHL4Q9C0H6 718 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 SDR39U1Q9NRG7 319 aaPredicted RBP15.61■□□□□ 0.09
SEC13-218ENST00000490283 PLSCR4Q9NRQ2 329 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 KLHL28Q9NXS3 571 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 KCNE5Q9UJ90 142 aa15.61■□□□□ 0.09
SEC13-218ENST00000490283 CENPVL1A0A0U1RR11 272 aa15.6■□□□□ 0.09
SEC13-218ENST00000490283 TMEM247A6NEH6 219 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms