RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 STAB1Q9NY15 2570 aa5.73□□□□□ -1.49
PRPF40A-210ENST00000489741 ARID1AO14497 2285 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 A0A1W2PNV4 684 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 DEFB108AA8MXU0 73 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 CTIFO43310 598 aaKnown RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 FADS1O60427 444 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 PLOD3O60568 738 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 SLC43A1O75387 559 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 ERAL1O75616 437 aaKnown RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 BCAS2O75934 225 aaPredicted RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 SNUPNO95149 360 aaKnown RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 OTCP00480 354 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 HSD3B1P14060 373 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 CNTFP26441 200 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 LOXP28300 417 aaPredicted RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 DEKP35659 375 aaKnown RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 PNLIPRP2P54317 469 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 CDH13P55290 713 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 PSPHP78330 225 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 RAE1P78406 368 aaKnown RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 NKX6-1P78426 367 aaPredicted RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 SRYQ05066 204 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 FAM27E3Q08E93 113 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 PLCXD2Q0VAA5 305 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 TOMM20Q15388 145 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 GUSBP1Q15486 140 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 NNATQ16517 81 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 SGO1Q5FBB7 561 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 TTC19Q6DKK2 380 aaPredicted RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 FAM180BQ6P0A1 224 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 AAGABQ6PD74 315 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 ZNF474Q6S9Z5 364 aaPredicted RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 PRSS57Q6UWY2 283 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 NPSR1Q6W5P4 371 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 LUZP2Q86TE4 346 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 LRRC75A-AS1Q8N1F1 130 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 C1orf52Q8N6N3 182 aaKnown RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 GBP7Q8N8V2 638 aaPredicted RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 FADS6Q8N9I5 356 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 OR14L1PQ8NHC6 308 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 ACTRT2Q8TDY3 377 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 DCAKDQ8WVC6 231 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 SELENOMQ8WWX9 145 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 IGFBPL1Q8WX77 278 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 TMBIM1Q969X1 311 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 KLHL29Q96CT2 875 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 TMCO6Q96DC7 493 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 WFIKKN1Q96NZ8 548 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 VRK1Q99986 396 aaPredicted RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 MRPL57Q9BQC6 102 aaKnown RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 BRINP2Q9C0B6 783 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 MRPL46Q9H2W6 279 aaKnown RBP5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 ELOVL6Q9H5J4 265 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 ANKRA2Q9H9E1 313 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 TAS2R7Q9NYW3 318 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 EHD3Q9NZN3 535 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 KLRF1Q9NZS2 232 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 XPR1Q9UBH6 696 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 VPS29Q9UBQ0 182 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 NDRG3Q9UGV2 375 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 BCAP29Q9UHQ4 241 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 ZNF180Q9UJW8 692 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 UTS2RQ9UKP6 389 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 SNX6Q9UNH7 406 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 SLC12A4Q9UP95 1085 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 WIF1Q9Y5W5 379 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 ZNF780BQ9Y6R6 833 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 KIAA1549Q9HCM3 1950 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 FREM3P0C091 2139 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 HIVEP2P31629 2446 aa5.72□□□□□ -1.49
PRPF40A-210ENST00000489741 C17orf51A8MQB3 221 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 A8MT66 165 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 H0Y3Z8 333 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 MANBAO00462 879 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 SMIM24O75264 130 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 NME6O75414 186 aaPredicted RBP5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 REM1O75628 298 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 PSMG1O95456 288 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 CHN1P15882 459 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 TSPAN8P19075 237 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 CRYGSP22914 178 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 DPP4P27487 766 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 GCKP35557 465 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 CLK3P49761 638 aaKnown RBP5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 SERPINB9P50453 376 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 DIO3P55073 304 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 DSCR4P56555 118 aaPredicted RBP5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 PSG6Q00889 435 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 PIGFQ07326 219 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 EFR3AQ14156 821 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 TMEM44Q2T9K0 475 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 UNC50Q53HI1 259 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 TCHHL1Q5QJ38 904 aaPredicted RBP5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 ZNF678Q5SXM1 525 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 C6orf163Q5TEZ5 329 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 SCIMPQ6UWF3 145 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 TIFABQ6ZNK6 161 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 IFNEQ86WN2 208 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 PRIMA1Q86XR5 153 aa5.71□□□□□ -1.5
PRPF40A-210ENST00000489741 SAMD14Q8IZD0 417 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms