RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 GSPT2Q8IYD1 628 aaKnown RBP9.94□□□□□ -0.82
HDAC6-233ENST00000489352 LRRC57Q8N9N7 239 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 CEP70Q8NHQ1 597 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 ANKRD49Q8WVL7 239 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 SERPINI1Q99574 410 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 C3orf14Q9HBI5 128 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 ZNF275Q9NSD4 429 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-233ENST00000489352 UTS2RQ9UKP6 389 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 TSC22D4Q9Y3Q8 395 aa9.94□□□□□ -0.82
HDAC6-233ENST00000489352 TET2Q6N021 2002 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-233ENST00000489352 IGHV1-18A0A0C4DH31 117 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 FAM181BA6NEQ2 426 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 K7EPI3 171 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 COQ9O75208 318 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 KCNH1O95259 989 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 ESRRBO95718 433 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 FSHBP01225 129 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 ITGA5P08648 1049 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 SELEP16581 610 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 ATP4BP51164 291 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 PSG6Q00889 435 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 PDCD1Q15116 288 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 CPSF6Q16630 551 aaKnown RBP eCLIP9.93□□□□□ -0.82
HDAC6-233ENST00000489352 GRAMD1BQ3KR37 738 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 ELFN2Q5R3F8 820 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 LIPJQ5W064 366 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 CCBE1Q6UXH8 406 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-233ENST00000489352 CNTN4Q8IWV2 1026 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 BCL6BQ8N143 479 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-233ENST00000489352 GATSQ8NAP1 163 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 C1orf162Q8NEQ5 155 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-233ENST00000489352 OR9A2Q8NGT5 310 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 POC1BQ8TC44 478 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 ZNF75CPQ92670 426 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-233ENST00000489352 POP5Q969H6 163 aaKnown RBP9.93□□□□□ -0.82
HDAC6-233ENST00000489352 CNRIP1Q96F85 164 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-233ENST00000489352 MS4A5Q9H3V2 200 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 OPN4Q9UHM6 478 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 ADAM29Q9UKF5 820 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 RNF114Q9Y508 228 aa9.93□□□□□ -0.82
HDAC6-233ENST00000489352 C5orf63A6NC05 138 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 KIF2AO00139 706 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-233ENST00000489352 GPR171O14626 319 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 FRS3O43559 492 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 PIP5K1CO60331 668 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 SEMA3DO95025 777 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 GPANK1O95872 356 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 CDH2P19022 906 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-233ENST00000489352 THBS4P35443 961 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 ARL1P40616 181 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-233ENST00000489352 KCNJ1P48048 391 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 SLC25A3Q00325 362 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 FOXF1Q12946 379 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 SPANXN3Q5MJ09 141 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 TEDDM1Q5T9Z0 273 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 SAMD5Q5TGI4 173 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 APOOLQ6UXV4 268 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 RETREG3Q86VR2 466 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 CCDC170Q8IYT3 715 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 SAMD14Q8IZD0 417 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-233ENST00000489352 CDK20Q8IZL9 346 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 OR52E4Q8NGH9 312 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 B4GALNT2Q8NHY0 566 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 FBXO27Q8NI29 283 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 TRPC4APQ8TEL6 797 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 ARL8AQ96BM9 186 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 CERS2Q96G23 380 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 SIGLEC10Q96LC7 697 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 ZNF48Q96MX3 618 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-233ENST00000489352 TRIM5Q9C035 493 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 DERL2Q9GZP9 239 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 ZNF442Q9H7R0 627 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 COQ10BQ9H8M1 238 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 GIMAP4Q9NUV9 329 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 NECAP2Q9NVZ3 263 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 REV1Q9UBZ9 1251 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 MALT1Q9UDY8 824 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 DCTN4Q9UJW0 460 aa9.92□□□□□ -0.82
HDAC6-233ENST00000489352 FAM95CA0A1B0GW59 222 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 A0A1W2PNR3 127 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 H0YIV9 168 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 CCDC188H7C350 402 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 CBFA2T2O43439 604 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 ERLIN1O75477 346 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 HPXP02790 462 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 TCN1P20061 433 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-233ENST00000489352 PAX7P23759 505 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 GP5P40197 560 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 MAGEA6P43360 314 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 FOXG1P55316 489 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-233ENST00000489352 MVKQ03426 396 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 KCTD19Q17RG1 926 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-233ENST00000489352 OTUD3Q5T2D3 398 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-233ENST00000489352 DRICH1Q6PGQ1 229 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-233ENST00000489352 MISPQ8IVT2 679 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 WDFY1Q8IWB7 410 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 TEX9Q8N6V9 391 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 NOA1Q8NC60 698 aaKnown RBP9.91□□□□□ -0.82
HDAC6-233ENST00000489352 PDPRQ8NCN5 879 aa9.91□□□□□ -0.82
HDAC6-233ENST00000489352 NUP37Q8NFH4 326 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms