RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ZG16BQ96DA0 208 aa22.38■■□□□ 1.17
HMGN1-217ENST00000489072 LAT2Q9GZY6 243 aa22.38■■□□□ 1.17
HMGN1-217ENST00000489072 MCTS1Q9ULC4 181 aaKnown RBP22.38■■□□□ 1.17
HMGN1-217ENST00000489072 SH3D21A4FU49 640 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 ETV2O00321 342 aaPredicted RBP22.37■■□□□ 1.17
HMGN1-217ENST00000489072 DNAJA2O60884 412 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 BCAS1O75363 584 aaPredicted RBP22.37■■□□□ 1.17
HMGN1-217ENST00000489072 SLC22A3O75751 556 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 SYNGR4O95473 234 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 CD8BP10966 210 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 NID1P14543 1247 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 QPRTQ15274 297 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 SLC25A53Q5H9E4 307 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 ZNF621Q6ZSS3 439 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 HMGN2P46Q86SG4 172 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 ZNF610Q8N9Z0 462 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 MRGPRX4Q96LA9 322 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 DACH2Q96NX9 599 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 THUMPD3Q9BV44 507 aaKnown RBP22.37■■□□□ 1.17
HMGN1-217ENST00000489072 POLE3Q9NRF9 147 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 SLC6A13Q9NSD5 602 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 USH1CQ9Y6N9 552 aa22.37■■□□□ 1.17
HMGN1-217ENST00000489072 ITPR3Q14573 2671 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 DIAPH2O60879 1101 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 SS18L1O75177 396 aaPredicted RBP22.36■■□□□ 1.17
HMGN1-217ENST00000489072 CYP7B1O75881 506 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 CSTAP01040 98 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 CD79BP40259 229 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 CBFBQ13951 182 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 FGFBP1Q14512 234 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 GSTA3Q16772 222 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 PDSS1Q5T2R2 415 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 ZNF619Q8N2I2 560 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 TRIML2Q8N7C3 387 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 FAM71CQ8NEG0 241 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 GMPPAQ96IJ6 420 aaPredicted RBP22.36■■□□□ 1.17
HMGN1-217ENST00000489072 C7orf26Q96N11 449 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 SRXN1Q9BYN0 137 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 SDR39U1Q9NRG7 319 aaPredicted RBP22.36■■□□□ 1.17
HMGN1-217ENST00000489072 ZIM2Q9NZV7 527 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 PROCRQ9UNN8 238 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 TESMINQ9Y4I5 508 aa22.36■■□□□ 1.17
HMGN1-217ENST00000489072 UBDO15205 165 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 H6PDO95479 791 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 IL6P05231 212 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 UBTFL6P0CB48 400 aaPredicted RBP22.35■■□□□ 1.17
HMGN1-217ENST00000489072 CCKARP32238 428 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 PGM1P36871 562 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 PCYT1AP49585 367 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 CARD18P57730 90 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 PLAURQ03405 335 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 CHRNEQ04844 493 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 LRRC74AQ0VAA2 488 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 SYPL1Q16563 259 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 TMEM176BQ3YBM2 270 aaPredicted RBP22.35■■□□□ 1.17
HMGN1-217ENST00000489072 GPAT3Q53EU6 434 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 COX20Q5RI15 118 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 EPGNQ6UW88 154 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 EIF3MQ7L2H7 374 aaKnown RBP22.35■■□□□ 1.17
HMGN1-217ENST00000489072 ANKFN1Q8N957 763 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 ATP6V1C2Q8NEY4 427 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 OR9I1Q8NGQ6 314 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 PNPT1Q8TCS8 783 aaKnown RBP22.35■■□□□ 1.17
HMGN1-217ENST00000489072 ROBO4Q8WZ75 1007 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 QRSL1Q9H0R6 528 aaKnown RBP22.35■■□□□ 1.17
HMGN1-217ENST00000489072 COQ10BQ9H8M1 238 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 SLCO1B3Q9NPD5 702 aa22.35■■□□□ 1.17
HMGN1-217ENST00000489072 FREM1Q5H8C1 2179 aa22.34■■□□□ 1.17
HMGN1-217ENST00000489072 PLGP00747 810 aaPredicted RBP22.34■■□□□ 1.17
HMGN1-217ENST00000489072 ZNF239Q16600 458 aaKnown RBP22.34■■□□□ 1.17
HMGN1-217ENST00000489072 DNAJC14Q6Y2X3 702 aaPredicted RBP22.34■■□□□ 1.17
HMGN1-217ENST00000489072 OR6K3Q8NGY3 331 aa22.34■■□□□ 1.17
HMGN1-217ENST00000489072 OIT3Q8WWZ8 545 aa22.34■■□□□ 1.17
HMGN1-217ENST00000489072 ELOVL5Q9NYP7 299 aa22.34■■□□□ 1.17
HMGN1-217ENST00000489072 EMC9Q9Y3B6 208 aa22.34■■□□□ 1.17
HMGN1-217ENST00000489072 MED13LQ71F56 2210 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 CLDN24A6NM45 220 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 RFXANKO14593 260 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 HRGP04196 525 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 CHRM4P08173 479 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 POU2F1P14859 743 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 IST1P53990 364 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 CTBP2P56545 445 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 SELENBP1Q13228 472 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 LRRC8CQ8TDW0 803 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 ZFP90Q8TF47 636 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 WFIKKN1Q96NZ8 548 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 TRNT1Q96Q11 434 aaKnown RBP22.33■■□□□ 1.17
HMGN1-217ENST00000489072 SLC39A3Q9BRY0 314 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 SLC38A1Q9H2H9 487 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 PLSCR4Q9NRQ2 329 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 ST6GALNAC2Q9UJ37 374 aa22.33■■□□□ 1.17
HMGN1-217ENST00000489072 PRRC2AP48634 2157 aaKnown RBP22.32■■□□□ 1.16
HMGN1-217ENST00000489072 GJE1A6NN92 205 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 UGT2B10P36537 528 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 MVDP53602 400 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 SESN3P58005 492 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 HPCAP84074 193 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 POU4F3Q15319 338 aa22.32■■□□□ 1.16
HMGN1-217ENST00000489072 TIGD2Q4W5G0 525 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms