RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 OR12D1P0DN82 309 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 NID1P14543 1247 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 KLK2P20151 261 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 AGTR1P30556 359 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 NME5P56597 212 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 PPP2R2AP63151 447 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 CBFBQ13951 182 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 CASP8Q14790 479 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 QPRTQ15274 297 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 TMEM176BQ3YBM2 270 aaPredicted RBP20.55■□□□□ 0.88
COL9A3-213ENST00000489045 FAM174BQ3ZCQ3 159 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 SAXO2Q658L1 398 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 TNFAIP8L2Q6P589 184 aaPredicted RBP20.55■□□□□ 0.88
COL9A3-213ENST00000489045 C22orf34Q6ZV56 151 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 MGARPQ8TDB4 240 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 RNF128Q8TEB7 428 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 CPNE4Q96A23 557 aaPredicted RBP20.55■□□□□ 0.88
COL9A3-213ENST00000489045 ARSGQ96EG1 525 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 PIK3IP1Q96FE7 263 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 TIGARQ9NQ88 270 aa20.55■□□□□ 0.88
COL9A3-213ENST00000489045 NF1P21359 2839 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 KIAA0513O60268 411 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 CYP7B1O75881 506 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 AGR2O95994 175 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 CD53P19397 219 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 S100A3P33764 101 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 SELENBP1Q13228 472 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 SKP2Q13309 424 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 SLC25A53Q5H9E4 307 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 ATAD3BQ5T9A4 648 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 GTF2IRD2BQ6EKJ0 949 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 GTF2IRD2Q86UP8 949 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 ZFP90Q8TF47 636 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 ABHD3Q8WU67 409 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 XAGE5Q8WWM1 108 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 RAB8BQ92930 207 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 NEURL3Q96EH8 262 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 REXO5Q96IC2 774 aaKnown RBP20.54■□□□□ 0.88
COL9A3-213ENST00000489045 TEX37Q96LM6 180 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 LAT2Q9GZY6 243 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 C12orf49Q9H741 205 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 COQ10BQ9H8M1 238 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 AIG1Q9NVV5 245 aa20.54■□□□□ 0.88
COL9A3-213ENST00000489045 C9JVG2 144 aa20.53■□□□□ 0.88
COL9A3-213ENST00000489045 PABPC4LP0CB38 370 aaKnown RBP20.53■□□□□ 0.88
COL9A3-213ENST00000489045 KHKP50053 298 aa20.53■□□□□ 0.88
COL9A3-213ENST00000489045 UFM1P61960 85 aa20.53■□□□□ 0.88
COL9A3-213ENST00000489045 FUT5Q11128 374 aa20.53■□□□□ 0.88
COL9A3-213ENST00000489045 STAC2Q6ZMT1 411 aa20.53■□□□□ 0.88
COL9A3-213ENST00000489045 MARK4Q96L34 752 aa20.53■□□□□ 0.88
COL9A3-213ENST00000489045 SLC35A5Q9BS91 424 aa20.53■□□□□ 0.88
COL9A3-213ENST00000489045 THUMPD3Q9BV44 507 aaKnown RBP20.53■□□□□ 0.88
COL9A3-213ENST00000489045 THAP1Q9NVV9 213 aa20.53■□□□□ 0.88
COL9A3-213ENST00000489045 MARCOQ9UEW3 520 aaPredicted RBP20.53■□□□□ 0.88
COL9A3-213ENST00000489045 WDR45Q9Y484 360 aa20.53■□□□□ 0.88
COL9A3-213ENST00000489045 FREM1Q5H8C1 2179 aa20.53■□□□□ 0.88
COL9A3-213ENST00000489045 RAI1Q7Z5J4 1906 aaPredicted RBP20.53■□□□□ 0.88
COL9A3-213ENST00000489045 GOLGA8QA0A0J9YX86 632 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 GOLGA8OA6NCC3 632 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 GOLGA8NF8WBI6 632 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 ETV2O00321 342 aaPredicted RBP20.52■□□□□ 0.88
COL9A3-213ENST00000489045 SNNO75324 88 aaPredicted RBP20.52■□□□□ 0.88
COL9A3-213ENST00000489045 CSTAP01040 98 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 C1QCP02747 245 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 UBTFL6P0CB48 400 aaPredicted RBP20.52■□□□□ 0.88
COL9A3-213ENST00000489045 EPHA3P29320 983 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 CHI3L1P36222 383 aaPredicted RBP20.52■□□□□ 0.88
COL9A3-213ENST00000489045 FOXD4Q12950 439 aaPredicted RBP20.52■□□□□ 0.88
COL9A3-213ENST00000489045 MAPK14Q16539 360 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 TYW3Q6IPR3 259 aaKnown RBP20.52■□□□□ 0.88
COL9A3-213ENST00000489045 BEND4Q6ZU67 534 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 SPATA19Q7Z5L4 167 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 STK32CQ86UX6 486 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 ROPN1LQ96C74 230 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 CCDC115Q96NT0 180 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 WDR55Q9H6Y2 383 aaPredicted RBP20.52■□□□□ 0.88
COL9A3-213ENST00000489045 BTNL2Q9UIR0 455 aa20.52■□□□□ 0.88
COL9A3-213ENST00000489045 HDAC3O15379 428 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 DNAJA2O60884 412 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 THBDP07204 575 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 KITP10721 976 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 IL12AP29459 219 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 SLC7A1P30825 629 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 ADAM8P78325 824 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 RNPS1Q15287 305 aaKnown RBP20.51■□□□□ 0.87
COL9A3-213ENST00000489045 TIGD2Q4W5G0 525 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 FRRS1Q6ZNA5 592 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 EIF3MQ7L2H7 374 aaKnown RBP20.51■□□□□ 0.87
COL9A3-213ENST00000489045 FCRLAQ7L513 359 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 ST8SIA1Q92185 356 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 HS3ST6Q96QI5 342 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 QRSL1Q9H0R6 528 aaKnown RBP20.51■□□□□ 0.87
COL9A3-213ENST00000489045 FANCFQ9NPI8 374 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 POLE3Q9NRF9 147 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 KLHL13Q9P2N7 655 aa20.51■□□□□ 0.87
COL9A3-213ENST00000489045 VPS13CQ709C8 3753 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 A0A1W2PNR3 127 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 TRPC5OSA6NMA1 111 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 GUSBP08236 651 aa20.5■□□□□ 0.87
COL9A3-213ENST00000489045 PPP3CBP16298 524 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms