RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 MED18Q9BUE0 208 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 CXXC4Q9H2H0 198 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 CCM2LQ9NUG4 571 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 MARCOQ9UEW3 520 aaPredicted RBP12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 WDR45Q9Y484 360 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 MED13LQ71F56 2210 aa12.37□□□□□ -0.43
SPTLC1-207ENST00000488921 C16orf97H3BN30 126 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 ZNF195O14628 629 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 OIP5O43482 229 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 KIAA0513O60268 411 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 UGT2B17O75795 530 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 CSTAP01040 98 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 OPN1LWP04000 364 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 PGRP06401 933 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 OR12D1P0DN82 309 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 PGCP20142 388 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 IL11P20809 199 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 EPHA3P29320 983 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 SLC7A1P30825 629 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 SLC6A8P48029 635 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 RNF144AP50876 292 aaPredicted RBP12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 PHC1P78364 1004 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 SKP2Q13309 424 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 RNPS1Q15287 305 aaKnown RBP12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 ZNF239Q16600 458 aaKnown RBP12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 SLC25A53Q5H9E4 307 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 C3orf33Q6P1S2 294 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 TNFAIP8L2Q6P589 184 aaPredicted RBP12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 ZNF619Q8N2I2 560 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 ZNF610Q8N9Z0 462 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 ZFP90Q8TF47 636 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 XAGE5Q8WWM1 108 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 TMEM234Q8WY98 164 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 ST8SIA1Q92185 356 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 OSTF1Q92882 214 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 MBD6Q96DN6 1003 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 ALPK1Q96QP1 1244 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 PANX1Q96RD7 426 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 KLHDC3Q9BQ90 382 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 LAT2Q9GZY6 243 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 MANSC1Q9H8J5 431 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 PLSCR4Q9NRQ2 329 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 MKLN1Q9UL63 735 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 SLC35A3Q9Y2D2 325 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 PLEKHA6Q9Y2H5 1048 aa12.36□□□□□ -0.43
SPTLC1-207ENST00000488921 GOLGA8QA0A0J9YX86 632 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 GOLGA8OA6NCC3 632 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 GOLGA8NF8WBI6 632 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 ETV2O00321 342 aaPredicted RBP12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 FCMRO60667 390 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 CYP7B1O75881 506 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 NTN1O95631 604 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 KITP10721 976 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 IDO1P14902 403 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 PPP3CBP16298 524 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 AGTR1P30556 359 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 CCKARP32238 428 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 NME5P56597 212 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 UFM1P61960 85 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 KEAP1Q14145 624 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 QPRTQ15274 297 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 POU4F3Q15319 338 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 TOMM34Q15785 309 aaPredicted RBP12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 NDUFAF6Q330K2 333 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 GPAT3Q53EU6 434 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 TMEM201Q5SNT2 666 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 NXNQ6DKJ4 435 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 BEND4Q6ZU67 534 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 PIWIL2Q8TC59 973 aaKnown RBP12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 RNF128Q8TEB7 428 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 ROPN1LQ96C74 230 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 WFIKKN1Q96NZ8 548 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 OR52E6Q96RD3 313 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 TACO1Q9BSH4 297 aaKnown RBP12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 LIME1Q9H400 295 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 WDR55Q9H6Y2 383 aaPredicted RBP12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 PLEKHF2Q9H8W4 249 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 GP6Q9HCN6 339 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 INTS9Q9NV88 658 aaKnown RBP12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 KLHL28Q9NXS3 571 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 CLEC4AQ9UMR7 237 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 LIPT1Q9Y234 373 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 GPR45Q9Y5Y3 372 aa12.35□□□□□ -0.43
SPTLC1-207ENST00000488921 CCDC154A6NI56 674 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 KLF11O14901 512 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 IL6P05231 212 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 UBTFL6P0CB48 400 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 CRYGSP22914 178 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 SHC1P29353 583 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 CASP9P55211 416 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 GSTA3Q16772 222 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 EXOC3L2Q2M3D2 409 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 TMEM176BQ3YBM2 270 aaPredicted RBP12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 PDCD4Q53EL6 469 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 AP1ARQ63HQ0 302 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 TYW3Q6IPR3 259 aaKnown RBP12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 FCRLAQ7L513 359 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 SLC43A2Q8N370 569 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 FAM71CQ8NEG0 241 aa12.34□□□□□ -0.43
SPTLC1-207ENST00000488921 RAB8BQ92930 207 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms