RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 PLCXD1Q9NUJ7 323 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 IMPAD1Q9NX62 359 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 NPFFR2Q9Y5X5 522 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 HS3ST3B1Q9Y662 390 aa8.65□□□□□ -1.02
SF3B1-211ENST00000487698 CFAP54Q96N23 3096 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 C9orf172C9J069 976 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 CDC42EP2O14613 210 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 PPM1BO75688 479 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 JMJD7P0C870 316 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 PTNP21246 168 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 EEF1B2P24534 225 aaKnown RBP8.65□□□□□ -1.03
SF3B1-211ENST00000487698 GIPRP48546 466 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 SNRPGP62308 76 aaKnown RBP8.65□□□□□ -1.03
SF3B1-211ENST00000487698 ZNF117Q03924 483 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 TRIP6Q15654 476 aaKnown RBP8.65□□□□□ -1.03
SF3B1-211ENST00000487698 TMEM201Q5SNT2 666 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 DHRS13Q6UX07 377 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 C6orf15Q6UXA7 325 aaPredicted RBP8.65□□□□□ -1.03
SF3B1-211ENST00000487698 C16orf47Q6ZP98 133 aaPredicted RBP8.65□□□□□ -1.03
SF3B1-211ENST00000487698 TMPRSS11FQ6ZWK6 438 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 TIPARPQ7Z3E1 657 aaKnown RBP8.65□□□□□ -1.03
SF3B1-211ENST00000487698 CADM2Q8N3J6 435 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 PHOSPHO1Q8TCT1 267 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 ELP5Q8TE02 316 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 C3orf49Q96BT1 292 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 IMMP1LQ96LU5 166 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 PHOX2BQ99453 314 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 PRRX2Q99811 253 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 RHNO1Q9BSD3 238 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 LAT2Q9GZY6 243 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 POLR1BQ9H9Y6 1135 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 FKBP14Q9NWM8 211 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 IL20Q9NYY1 176 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 CARD8Q9Y2G2 431 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 TPRKBQ9Y3C4 175 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 CDH10Q9Y6N8 788 aa8.65□□□□□ -1.03
SF3B1-211ENST00000487698 CUL9Q8IWT3 2517 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 FAM20BO75063 409 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 CD63P08962 238 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 IFI30P13284 250 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 NAGAP17050 411 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 JUNBP17275 347 aaPredicted RBP8.64□□□□□ -1.03
SF3B1-211ENST00000487698 MAKP20794 623 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 MST1P26927 711 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 EVI2BP34910 448 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 NBL1P41271 181 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 FOLR3P41439 243 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 EFNB1P98172 346 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 EFR3AQ14156 821 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 GINS1Q14691 196 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 HES3Q5TGS1 186 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 XAF1Q6GPH4 301 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 BORAQ6PGQ7 559 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 LYPD8Q6UX82 237 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 KCTD8Q6ZWB6 473 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 P3H2Q8IVL5 708 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 SPARTQ8N0X7 666 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 IQCF1Q8N6M8 205 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 OR5L2Q8NGL0 311 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 DNAJA4Q8WW22 397 aaPredicted RBP8.64□□□□□ -1.03
SF3B1-211ENST00000487698 TRUB1Q8WWH5 349 aaKnown RBP8.64□□□□□ -1.03
SF3B1-211ENST00000487698 FGF11Q92914 225 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 NODALQ96S42 347 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 CCNL2Q96S94 520 aaPredicted RBP8.64□□□□□ -1.03
SF3B1-211ENST00000487698 LRFN3Q9BTN0 628 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 DPH1Q9BZG8 443 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 ATP13A2Q9NQ11 1180 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 SCN3BQ9NY72 215 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 NDUFA13Q9P0J0 144 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 RPS6KB2Q9UBS0 482 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 PADI1Q9ULC6 663 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 ICAM5Q9UMF0 924 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 TMEM5Q9Y2B1 443 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 MED31Q9Y3C7 131 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 PCDHGB1Q9Y5G3 927 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 PCSK5Q92824 1860 aa8.64□□□□□ -1.03
SF3B1-211ENST00000487698 A0A087WUJ7 227 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 SOCS6O14544 535 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 EIF4E2O60573 245 aaKnown RBP8.63□□□□□ -1.03
SF3B1-211ENST00000487698 MRPS14O60783 128 aaKnown RBP8.63□□□□□ -1.03
SF3B1-211ENST00000487698 ZFAND5O76080 213 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 RAB40ALP0C0E4 278 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 ENDOUP21128 410 aaKnown RBP8.63□□□□□ -1.03
SF3B1-211ENST00000487698 SMSP52788 366 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 FXYD6P3P58550 94 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 COPZ1P61923 177 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 PIGFQ07326 219 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 STPG1Q5TH74 334 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 WBP2NLQ6ICG8 309 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 ACSM5Q6NUN0 579 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 SLC27A4Q6P1M0 643 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 CASP12Q6UXS9 341 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 PTCHD4Q6ZW05 846 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 ATG4DQ86TL0 474 aaPredicted RBP8.63□□□□□ -1.03
SF3B1-211ENST00000487698 MARCH3Q86UD3 253 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 OR11G2Q8NGC1 345 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 OR8J1Q8NGP2 316 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 TEX47Q8TBZ9 253 aa8.63□□□□□ -1.03
SF3B1-211ENST00000487698 BRIX1Q8TDN6 353 aaKnown RBP8.63□□□□□ -1.03
SF3B1-211ENST00000487698 THAP3Q8WTV1 239 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms