RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 RIPPLY2Q5TAB7 128 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 FAM45BPQ6NSW5 357 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 CCDC137Q6PK04 289 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 OPN5Q6U736 354 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 TMIGD1Q6UXZ0 262 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 C16orf47Q6ZP98 133 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 CTAGE6Q86UF2 777 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 KLHDC8AQ8IYD2 350 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 TMEM251Q8N6I4 163 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 TRIM58Q8NG06 486 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 OR2L5Q8NG80 312 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 OR5L2Q8NGL0 311 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 OR5M9Q8NGP3 310 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 FAM45AQ8TCE6 357 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 FAM222BQ8WU58 562 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 PTPMT1Q8WUK0 201 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 MAGOHBQ96A72 148 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 MS4A6EQ96DS6 147 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 TSNARE1Q96NA8 513 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 QRFPRQ96P65 431 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 RASL10BQ96S79 203 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 SERINC2Q96SA4 455 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 PRPF18Q99633 342 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 CAPS2Q9BXY5 557 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 NT5DC2Q9H857 520 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 LIN28AQ9H9Z2 209 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 LZTFL1Q9NQ48 299 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 RASSF1Q9NS23 344 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 ACAD8Q9UKU7 415 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 DAPP1Q9UN19 280 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC22A14Q9Y267 594 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 RPH3AQ9Y2J0 694 aaPredicted RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 FN1P02751 2386 aaKnown RBP3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 KIAA1549Q9HCM3 1950 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 DSCAMO60469 2012 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 HEATR5AQ86XA9 2040 aa3.6□□□□□ -1.83
SNRNP40-205ENST00000486941 HIVEP2P31629 2446 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 TRGV5A0A0B4J1U4 118 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 A0A0G2JMM0 328 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 A0A0G2JN53 185 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 ATP6AP2A0A1C7CYW4 349 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 A0A1W2PPB8 328 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 A0A1W2PRS3 328 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 ANKDD1BA6NHY2 528 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 KIR3DP1A8MWS1 328 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 C17orf105B2RV13 164 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 G3V3Y1 287 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 ERI3O43414 337 aaKnown RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 XPNPEP2O43895 674 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNF354AO60765 605 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 ATP6AP2O75787 350 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 GOSR1O95249 250 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 TNFRSF6BO95407 300 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 EPPINO95925 133 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 TBX6O95947 436 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 IFNA16P05015 189 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 MYZAPP0CAP1 466 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 CFC1BP0CG36 223 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 CFC1P0CG37 223 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 TNNI3P19429 210 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 SAT1P21673 171 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 HNRNPH1P31943 449 aaKnown RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 CEACAM8P31997 349 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 GGT5P36269 586 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC6A12P48065 614 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 DNASE1L1P49184 302 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 CRIP2P52943 208 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 MTTPP55157 894 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 BRWD1-AS2P59051 145 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 CCZ1BP86790 482 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 CCZ1P86791 482 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 TGM3Q08188 693 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 STX4Q12846 297 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 FOXD4Q12950 439 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 BIKQ13323 160 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 SERTAD2Q14140 314 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 FRG1Q14331 258 aaKnown RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 CEBPEQ15744 281 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 PPP1R3AQ16821 1122 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNF791Q3KP31 576 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 PIGGQ5H8A4 983 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 CDKL4Q5MAI5 379 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 RNASEH2BQ5TBB1 312 aaKnown RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC22A10Q63ZE4 541 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 TRIM40Q6P9F5 258 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 FAM47EQ6ZV65 393 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 MAATS1Q7Z4T9 603 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 TMPRSS11BQ86T26 416 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 BIVMQ86UB2 503 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 CDC20BQ86Y33 519 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 DND1Q8IYX4 353 aaKnown RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 FBXW8Q8N3Y1 598 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 RASGEF1CQ8N431 466 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 NKAPQ8N5F7 415 aaKnown RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 SPC24Q8NBT2 197 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 GOT1L1Q8NHS2 421 aaPredicted RBP3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 NUBPLQ8TB37 319 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC2A12Q8TD20 617 aa3.59□□□□□ -1.83
SNRNP40-205ENST00000486941 PAQR8Q8TEZ7 354 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms