RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 CYP7B1O75881 506 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 WDPCPO95876 746 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 ALPLP05186 524 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 PRKACGP22612 351 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 CBLP22681 906 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 CD96P40200 585 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 SLC6A8P48029 635 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 CLK3P49761 638 aaKnown RBP7.51□□□□□ -1.21
USP4-210ENST00000483212 P2RX1P51575 399 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 SUMO3P55854 103 aaPredicted RBP7.51□□□□□ -1.21
USP4-210ENST00000483212 TAS2R41P59536 307 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 C17orf67Q0P5P2 114 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 ST3GAL3Q11203 375 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 MFAP5Q13361 173 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 DAG1Q14118 895 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 TRAM2Q15035 370 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 INPP5JQ15735 1006 aaPredicted RBP7.51□□□□□ -1.21
USP4-210ENST00000483212 TOMM34Q15785 309 aaPredicted RBP7.51□□□□□ -1.21
USP4-210ENST00000483212 MICAQ29983 383 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 COL28A1Q2UY09 1125 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 DEFB109BQ30KR1 87 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 ABHD17BQ5VST6 288 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 PRAMEF20Q5VT98 475 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 SLC30A6Q6NXT4 461 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 PODNL1Q6PEZ8 512 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 IGFL2Q6UWQ7 119 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 STK32CQ86UX6 486 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 ZDHHC13Q8IUH4 622 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 CYP4Z2PQ8N1L4 340 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 PACRGLQ8N7B6 248 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 WDSUB1Q8N9V3 476 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 MDS2Q8NDY4 140 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 CATSPER1Q8NEC5 780 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 FDCSPQ8NFU4 85 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 OR2M3Q8NG83 312 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 OR52J3Q8NH60 311 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 OR5W2Q8NH69 310 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 B4GALNT2Q8NHY0 566 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 GPR119Q8TDV5 335 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 DUSP19Q8WTR2 217 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 SH3YL1Q96HL8 342 aaPredicted RBP7.51□□□□□ -1.21
USP4-210ENST00000483212 ZNF597Q96LX8 424 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 SIGLEC12Q96PQ1 595 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 ALPK1Q96QP1 1244 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 C9orf16Q9BUW7 83 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 FNDC11Q9BVV2 318 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 OSBPL10Q9BXB5 764 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 TRIM2Q9C040 744 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 KLHL4Q9C0H6 718 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 RNF32Q9H0A6 362 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 METTL7AQ9H8H3 244 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 SMURF2Q9HAU4 748 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 C8orf4Q9NR00 106 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 DEPPQ9NTK1 212 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 WDR70Q9NW82 654 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 ANKRD10Q9NXR5 420 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 GPR83Q9NYM4 423 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 STMN3Q9NZ72 180 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 KLRF1Q9NZS2 232 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 CNIH4Q9P003 139 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 PDP1Q9P0J1 537 aaPredicted RBP7.51□□□□□ -1.21
USP4-210ENST00000483212 TEKT2Q9UIF3 430 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 SLC7A7Q9UM01 511 aa7.51□□□□□ -1.21
USP4-210ENST00000483212 DOCK10Q96BY6 2186 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 APC2O95996 2303 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 LRRC3CA6NJW4 275 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 E9PQ18 207 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 H0YJX3 145 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 KLF4O43474 513 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 CHP2O43745 196 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 E2F6O75461 281 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 CCNB2O95067 398 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 HPRP00739 348 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 LINGO3P0C6S8 592 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 MSX1P28360 303 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 RYKP34925 604 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 IDH2P48735 452 aaKnown RBP7.5□□□□□ -1.21
USP4-210ENST00000483212 CYB561P49447 251 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 DAPP51397 102 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 ALDH3A2P51648 485 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 UGT2B15P54855 530 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 AQP4P55087 323 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 SMIM11AP58511 58 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 RPP38P78345 283 aaKnown RBP7.5□□□□□ -1.21
USP4-210ENST00000483212 TLE3Q04726 772 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 RAPSNQ13702 412 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 QPRTQ15274 297 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 SLC25A53Q5H9E4 307 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 OTUD3Q5T2D3 398 aaPredicted RBP7.5□□□□□ -1.21
USP4-210ENST00000483212 SWT1Q5T5J6 900 aaKnown RBP7.5□□□□□ -1.21
USP4-210ENST00000483212 AGAP7PQ5VUJ5 663 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 SLC22A10Q63ZE4 541 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 KDM4DQ6B0I6 523 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 OR5M10Q6IEU7 315 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 PGBD2Q6P3X8 592 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 ISLR2Q6UXK2 745 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 IZUMO2Q6UXV1 221 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 LINC00696Q6ZRV3 163 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 ZBTB49Q6ZSB9 765 aa7.5□□□□□ -1.21
USP4-210ENST00000483212 ATG4DQ86TL0 474 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms