RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.36□□□□□ -0.91
CPSF4-212ENST00000482251 PRSS51A0A1B0GVH4 220 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 CLDN24A6NM45 220 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 KIAA0513O60268 411 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 SCN2BO60939 215 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 STX11O75558 287 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 UGT2B17O75795 530 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 AK1P00568 194 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 TUBBP07437 444 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 CD99P14209 185 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 UQCRC2P22695 453 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 IL12AP29459 219 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 SLC7A1P30825 629 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 S100A3P33764 101 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 CDKN2CP42773 168 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 KHKP50053 298 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 CLNS1AP54105 237 aaKnown RBP9.35□□□□□ -0.91
CPSF4-212ENST00000482251 CARD18P57730 90 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 MAGOHP61326 146 aaKnown RBP9.35□□□□□ -0.91
CPSF4-212ENST00000482251 HPCAP84074 193 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 OCRLQ01968 901 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 FOXD4Q12950 439 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-212ENST00000482251 SELENBP1Q13228 472 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 CBFBQ13951 182 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 CASP8Q14790 479 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 TSC22D1Q15714 1073 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 MAPK14Q16539 360 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 ARHGAP11BQ3KRB8 267 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 ATAD3BQ5T9A4 648 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 ANXA8L1Q5VT79 327 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 SAXO2Q658L1 398 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 NXNQ6DKJ4 435 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 TYW3Q6IPR3 259 aaKnown RBP9.35□□□□□ -0.91
CPSF4-212ENST00000482251 RNF130Q86XS8 419 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 TGIF2LYQ8IUE0 185 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 WFDC11Q8NEX6 87 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 TOR1AIP2Q8NFQ8 470 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 OR5W2Q8NH69 310 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 RNF128Q8TEB7 428 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 CPNE4Q96A23 557 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-212ENST00000482251 REXO5Q96IC2 774 aaKnown RBP9.35□□□□□ -0.91
CPSF4-212ENST00000482251 THUMPD3Q9BV44 507 aaKnown RBP9.35□□□□□ -0.91
CPSF4-212ENST00000482251 NMUR2Q9GZQ4 415 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 EXD2Q9NVH0 621 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 PAQR5Q9NXK6 330 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-212ENST00000482251 ELOVL5Q9NYP7 299 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 ZNF226Q9NYT6 803 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 EDARQ9UNE0 448 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 WDR45Q9Y484 360 aa9.35□□□□□ -0.91
CPSF4-212ENST00000482251 GPC6Q9Y625 555 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-212ENST00000482251 ZNF469Q96JG9 3925 aaPredicted RBP9.35□□□□□ -0.91
CPSF4-212ENST00000482251 HEATR5AQ86XA9 2040 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 DUXAA6NLW8 204 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 GJE1A6NN92 205 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 SNNO75324 88 aaPredicted RBP9.34□□□□□ -0.91
CPSF4-212ENST00000482251 SNUPNO95149 360 aaKnown RBP9.34□□□□□ -0.91
CPSF4-212ENST00000482251 GOSR1O95249 250 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 H6PDO95479 791 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 GSNP06396 782 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 THBDP07204 575 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 CD53P19397 219 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 ENPP1P22413 925 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 CRYGSP22914 178 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 RYKP34925 604 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 ZNF141Q15928 474 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 DPY19L1Q2PZI1 675 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 TIGD2Q4W5G0 525 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 GPAT3Q53EU6 434 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 HEPHL1Q6MZM0 1159 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 OGFOD2Q6N063 350 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 C3orf33Q6P1S2 294 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 STAC2Q6ZMT1 411 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 FRRS1Q6ZNA5 592 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 FCRLAQ7L513 359 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.34□□□□□ -0.91
CPSF4-212ENST00000482251 NUFIP2Q7Z417 695 aaKnown RBP9.34□□□□□ -0.91
CPSF4-212ENST00000482251 MAVSQ7Z434 540 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 CROCCP2Q86T23 111 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 WFDC8Q8IUA0 241 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 TUSC5Q8IXB3 177 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 KIRREL3Q8IZU9 778 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 ZNF619Q8N2I2 560 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 VPS37AQ8NEZ2 397 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 ROPN1LQ96C74 230 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 NEURL3Q96EH8 262 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 MRGPRX4Q96LA9 322 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 OR5B2Q96R09 309 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 PANX1Q96RD7 426 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 NKIRAS1Q9NYS0 192 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 KLHL13Q9P2N7 655 aa9.34□□□□□ -0.91
CPSF4-212ENST00000482251 SETD2Q9BYW2 2564 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-212ENST00000482251 ITPR3Q14573 2671 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.33□□□□□ -0.92
CPSF4-212ENST00000482251 PRAMEF27A3QJZ7 478 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 CCDC154A6NI56 674 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 HMGN4O00479 90 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 HDAC3O15379 428 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 EIF4E2O60573 245 aaKnown RBP9.33□□□□□ -0.92
CPSF4-212ENST00000482251 PGRP06401 933 aa9.33□□□□□ -0.92
CPSF4-212ENST00000482251 NID1P14543 1247 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms