RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CLDN16Q9Y5I7 305 aa5.7□□□□□ -1.5
SF3B1-209ENST00000479532 AKAP13Q12802 2813 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 NCOR2Q9Y618 2525 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 A0A1W2PS29 197 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 ISPDA4D126 451 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 CCDC160A6NGH7 325 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 BBIP1A8MTZ0 92 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 RFXANKO14593 260 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 ANKRD28O15084 1053 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 PLOD3O60568 738 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 OR6B1O95007 311 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 CBX6O95503 412 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 DDAH2O95865 285 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 AGR2O95994 175 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 FSHBP01225 129 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 IGKV3-11P04433 115 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 CT62P0C5K7 136 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 PI3P19957 117 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 UQCRC2P22695 453 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 PPIBP23284 216 aaKnown RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 DCKP27707 260 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 CCT3P49368 545 aaKnown RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 SSR4P51571 173 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 GPR143P51810 404 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 DGKQP52824 942 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 SLC16A1P53985 500 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 PRKAG1P54619 331 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 PSMD4P55036 377 aaKnown RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 SLC37A1P57057 533 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 RPP38P78345 283 aaKnown RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 ARG2P78540 354 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 MRPS22P82650 360 aaKnown RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 STX5Q13190 355 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 KRR1Q13601 381 aaKnown RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 RCAN2Q14206 197 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 EXOSC7Q15024 291 aaKnown RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 TIGD2Q4W5G0 525 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 TRMT12Q53H54 448 aaKnown RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 FAM122CQ6P4D5 195 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 ZCCHC12Q6PEW1 402 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 FAM111BQ6SJ93 734 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 ANGPTL8Q6UXH0 198 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF621Q6ZSS3 439 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF551Q7Z340 670 aaPredicted RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 RPS19BP1Q86WX3 136 aaKnown RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 LACC1Q8IV20 430 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 GPALPP1Q8IXQ4 340 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 ULK2Q8IYT8 1036 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 DND1Q8IYX4 353 aaKnown RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 CADM3Q8N126 398 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 OR2L13Q8N349 312 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 ZADH2Q8N4Q0 377 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 TMEM156Q8N614 296 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 SLC15A4Q8N697 577 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 SIRT6Q8N6T7 355 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 APCDD1LQ8NCL9 501 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 C17orf47Q8NEP4 570 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 FDCSPQ8NFU4 85 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 C9orf43Q8TAL5 461 aaPredicted RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 CTHRC1Q96CG8 243 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 CMTM5Q96DZ9 223 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 ELP4Q96EB1 424 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 SLC35G5Q96KT7 338 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 TEX37Q96LM6 180 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 CCDC115Q96NT0 180 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 MS4A4EQ96PG1 132 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 LMF1Q96S06 567 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 NUDT9Q9BW91 350 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 WWTR1Q9GZV5 400 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 RAD21L1Q9H4I0 556 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 CDCP1Q9H5V8 836 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 SP140LQ9H930 580 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 PNPLA3Q9NST1 481 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 ZCCHC3Q9NUD5 404 aaKnown RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 STMN3Q9NZ72 180 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 TAGLN3Q9UI15 199 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 ZNF639Q9UID6 485 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 MAGEL2Q9UJ55 1249 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 NUP50Q9UKX7 468 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 C19orf53Q9UNZ5 99 aaPredicted RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 CORO2BQ9UQ03 480 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 YARS2Q9Y2Z4 477 aaKnown RBP5.69□□□□□ -1.5
SF3B1-209ENST00000479532 NDUFAF1Q9Y375 327 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 OR10H1Q9Y4A9 318 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 PCDHGB3Q9Y5G1 929 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 APC2O95996 2303 aa5.69□□□□□ -1.5
SF3B1-209ENST00000479532 A0A087WXM4 84 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 RNF103-CHMP3A0A140T963 221 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 A0A1W2PP18 115 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 DUXAA6NLW8 204 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 EIF4E1BA6NMX2 242 aaKnown RBP5.68□□□□□ -1.5
SF3B1-209ENST00000479532 A8MVJ9 347 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 FAM25AB3EWG3 89 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 FAM25CB3EWG5 89 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 FAM25GB3EWG6 89 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 C9JVG2 144 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 MAGEB3O15480 346 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 SULT1B1O43704 296 aa5.68□□□□□ -1.5
SF3B1-209ENST00000479532 HS6ST1O60243 411 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms