RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ESPNLQ6ZVH7 1005 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 DHDDSQ86SQ9 333 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 RETREG3Q86VR2 466 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 ZNF614Q8N883 585 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 BBS10Q8TAM1 723 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 POC1BQ8TC44 478 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 SH3GL1Q99961 368 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 CPPED1Q9BRF8 314 aaPredicted RBP13.95□□□□□ -0.18
C9orf3-217ENST00000479161 SPATA9Q9BWV2 254 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 NSRP1Q9H0G5 558 aaKnown RBP13.95□□□□□ -0.18
C9orf3-217ENST00000479161 ARMC7Q9H6L4 198 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 ACER3Q9NUN7 267 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 Q9UFV3 132 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 VDAC3Q9Y277 283 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 UNC79Q9P2D8 2635 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 NBPF19A0A087WUL8 3843 aa13.95□□□□□ -0.18
C9orf3-217ENST00000479161 CDHR4A6H8M9 788 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 GJE1A6NN92 205 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 OIP5O43482 229 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 PGM3O95394 542 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 BCHEP06276 602 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 ME2P23368 584 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 LARS2Q15031 903 aaKnown RBP13.94□□□□□ -0.18
C9orf3-217ENST00000479161 TRMT5Q32P41 509 aaKnown RBP13.94□□□□□ -0.18
C9orf3-217ENST00000479161 LIN52Q52LA3 116 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 GCNT6Q5T4J0 391 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 OR2A2Q6IF42 318 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 REEP3Q6NUK4 255 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 CHMP1BQ7LBR1 199 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 SPATA21Q7Z572 469 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 NET1Q7Z628 596 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-217ENST00000479161 SERPINA11Q86U17 422 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 GGNQ86UU5 652 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 SLC30A8Q8IWU4 369 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 PCYOX1LQ8NBM8 494 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 BHLHE22Q8NFJ8 381 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-217ENST00000479161 RP9Q8TA86 221 aaKnown RBP13.94□□□□□ -0.18
C9orf3-217ENST00000479161 WDR60Q8WVS4 1066 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 TMEM19Q96HH6 336 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 ADGRG7Q96K78 797 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 RNF145Q96MT1 663 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 THUMPD3Q9BV44 507 aaKnown RBP13.94□□□□□ -0.18
C9orf3-217ENST00000479161 EVA1AQ9H8M9 152 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 CAPN7Q9Y6W3 813 aa13.94□□□□□ -0.18
C9orf3-217ENST00000479161 KIAA1549Q9HCM3 1950 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 CLCA1A8K7I4 914 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 FBP2O00757 339 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 SNX3O60493 162 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 NUDT14O95848 222 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 UBTFL6P0CB48 400 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-217ENST00000479161 CTSSP25774 331 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 HTR1EP28566 365 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 OPRM1P35372 400 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 APOBEC1P41238 236 aaKnown RBP13.93□□□□□ -0.18
C9orf3-217ENST00000479161 HTR3AP46098 478 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 PCYT1AP49585 367 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 CLK1P49759 484 aaKnown RBP13.93□□□□□ -0.18
C9orf3-217ENST00000479161 SUCLG1P53597 346 aaKnown RBP13.93□□□□□ -0.18
C9orf3-217ENST00000479161 CDK6Q00534 326 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 PLAURQ03405 335 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 SELENBP1Q13228 472 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 NFYCQ13952 458 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 QPRTQ15274 297 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 ADRM1Q16186 407 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 FBXL19-AS1Q494R0 122 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 PDSS1Q5T2R2 415 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 POMZP3Q6PJE2 187 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 OLIG3Q7RTU3 272 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 OR8J3Q8NGG0 315 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 OR10Q1Q8NGQ4 319 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 OR52P1PQ8NH57 321 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 TRIB1Q96RU8 372 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 SPATA5L1Q9BVQ7 753 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 IKZF5Q9H5V7 419 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 KAT8Q9H7Z6 458 aaKnown RBP13.93□□□□□ -0.18
C9orf3-217ENST00000479161 KCNJ16Q9NPI9 418 aa13.93□□□□□ -0.18
C9orf3-217ENST00000479161 DNAJB12Q9NXW2 375 aaKnown RBP13.93□□□□□ -0.18
C9orf3-217ENST00000479161 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-217ENST00000479161 CRYBG3Q68DQ2 2970 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 H3BML4 177 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 DVL2O14641 736 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 NUDT7P0C024 238 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 FCGR2AP12318 317 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 UQCRBP14927 111 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 DRD4P21917 467 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 SLC6A2P23975 617 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 PEX19P40855 299 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 CLDN20P56880 219 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 SESN3P58005 492 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 SRYQ05066 204 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 TFF3Q07654 80 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 TOMM34Q15785 309 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-217ENST00000479161 CTU2Q2VPK5 515 aaKnown RBP13.92□□□□□ -0.18
C9orf3-217ENST00000479161 MRPL2Q5T653 305 aaKnown RBP13.92□□□□□ -0.18
C9orf3-217ENST00000479161 NCCRP1Q6ZVX7 275 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-217ENST00000479161 GRINAQ7Z429 371 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 KRT73Q86Y46 540 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 LILRA2Q8N149 483 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 TNIP2Q8NFZ5 429 aa13.92□□□□□ -0.18
C9orf3-217ENST00000479161 FBXO27Q8NI29 283 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms